Genome-Wide Analysis of the Growth-Regulating Factor (GRF) Family in Aquatic Plants and Their Roles in the ABA-Induced Turion Formation of .

Int J Mol Sci

The State Key Laboratory of Freshwater Ecology and Biotechnology, The Key Laboratory of Aquatic Biodiversity and Conservation of Chinese Academy of Sciences, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.

Published: September 2022

Growth-regulating factors (GRFs) are plant-specific transcription factors that play essential roles in regulating plant growth and stress response. The gene families have been described in several terrestrial plants, but a comprehensive analysis of these genes in diverse aquatic species has not been reported yet. In this study, we identified 130 genes in 13 aquatic plants, including floating plants (, , , , and ), floating-leaved plants ( and ), submersed plants (, , , and ), an emergent plant (), and an amphibious plant (). The gene structures, motifs, and cis-acting regulatory elements of these genes were analyzed. Phylogenetic analysis divided these into five clusters, and ABRE cis-elements were highly enriched in the promoter region of the in floating plants. We found that abscisic acid (ABA) is efficient at inducing the turion of (giant duckweed), accompanied by the fluctuated expression of genes in their fronds. Our results provide information about the gene family in aquatic species and lay the foundation for future studies on the functions of these genes.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9499638PMC
http://dx.doi.org/10.3390/ijms231810485DOI Listing

Publication Analysis

Top Keywords

family aquatic
8
aquatic plants
8
aquatic species
8
floating plants
8
plants
7
genes
5
genome-wide analysis
4
analysis growth-regulating
4
growth-regulating factor
4
factor grf
4

Similar Publications

In this study, a focus on the populations of bryophytes living in aquatic and humid habitats of Sicily is presented. This investigation aims to evaluate the consistency and diversity of this group of taxa. The complete list of taxa known to date in these habitats is provided, with reference to hornworts, liverworts, and mosses, and the patterns related to the biological, ecological, and chorological features of this bryophyte flora are also illustrated.

View Article and Find Full Text PDF

Watercress (), a freshwater aquatic plant in the Brassicaceae family, is characterized by its high content of specialized metabolites, including flavonoids, glucosinolates, and isothiocyanates. Traditionally, commercial cultivation is conducted in submerged beds using river or spring water, often on soil or gravel substrates. However, these methods have significant environmental impacts, such as promoting eutrophication due to excessive fertilizer use and contaminating water sources with pesticides.

View Article and Find Full Text PDF

belongs to the NOD-like receptor family and is recognized as a modulator of innate immune mechanisms. In this study, we firstly report that () acts as a negative regulator in the antiviral immune response. is ubiquitously expressed across tested tissues, displaying particularly high expression in the intestine, spleen, gill and kidney.

View Article and Find Full Text PDF

A Lateral Line Specific Mucin Involved in Cupula Growth and Vibration Detection in Zebrafish.

Int J Mol Sci

January 2025

Institute for Marine Biosystem and Neuroscience, International Center for Marine Studies, Shanghai Ocean University, Shanghai 201306, China.

The lateral line system in fish is crucial for detecting water flow, which facilitates various behaviors such as prey detection, predator avoidance, and rheotaxis. The cupula, a gelatinous structure overlaying the hair cells in neuromasts, plays a key role in transmitting mechanical stimuli to hair cells. However, the molecular composition of the cupula matrix remains poorly understood.

View Article and Find Full Text PDF

Aquatic Invertebrate Antimicrobial Peptides in the Fight Against Aquaculture Pathogens.

Microorganisms

January 2025

CIIMAR-Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos, s/n, 4450-208 Porto, Portugal.

The intensification of aquaculture has escalated disease outbreaks and overuse of antibiotics, driving the global antimicrobial resistance (AMR) crisis. Antimicrobial peptides (AMPs) provide a promising alternative due to their rapid, broad-spectrum activity, low AMR risk, and additional bioactivities, including immunomodulatory, anticancer, and antifouling properties. AMPs derived from aquatic invertebrates, particularly marine-derived, are well-suited for aquaculture, offering enhanced stability in high-salinity environments.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!