Using reporter gene () transcriptional fusions we examined the transcriptional dependencies of the promoter (P) and the entire operon regulatory region (P-) on eight transcription factors as well as the inducer, salicin, and an IS5 insertion upstream of P. Crp-cAMP is the primary activator of both P and the operon, while H-NS is a strong dominant operon repressor but only a weak repressor of P. H-NS may exert its repressive effect by looping the DNA at two binding sites. StpA is a relatively weak repressor in the absence of H-NS, while Fis also has a weak repressive effect. Salicin has no effect on P activity but causes a 30-fold induction of operon expression. Induction depends on the activity of the BglF transporter/kinase. IS5 insertion has only a moderate effect on P but causes a much greater activation of the operon expression by preventing the full repressive effects of H-NS and StpA. While several other transcription factors (BglJ, RcsB, and LeuO) have been reported to influence operon transcription when overexpressed, they had little or no effect when present at wild type levels. These results indicate the important transcriptional regulatory mechanisms operative on the operon in .
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http://dx.doi.org/10.3390/ijms231810343 | DOI Listing |
Avian Pathol
January 2025
São Paulo State University (UNESP), School of Agricultural and Veterinary Sciences, Jaboticabal, SP, 14884-900, Brazil.
It was previously reported that utilization of tetrathionate and 1,2-propanediol by spp. through the metabolic pathways encoded by and operons are related to overgrowth and out-competing microbiota in an anaerobic environment. However, recent knowledge demonstrated which strains in the absence of and genes provoke both higher intestinal colonization and spreading bacteria on faeces in relation to their respective wild-type strain, and generate more prominent inflammation as well.
View Article and Find Full Text PDFMol Ecol Resour
January 2025
Chair of Urban Water Systems Engineering, Technical University of Munich, Garching, Germany.
Known for its remarkable diversity and ecological importance, the fungal kingdom remains largely unexplored. In fact, the number of unknown and undescribed fungi is predicted to exceed the number of known fungal species by far. Despite efforts to uncover these dark fungal taxa, we still face inherent sampling biases and methodological limitations.
View Article and Find Full Text PDFDuring growth, differentiates into subpopulations of motile individuals and non-motile chains, associated with dispersal and biofilm formation respectively. The two cell types are dictated by the activity of the alternative sigma factor SigD encoded as the penultimate gene of the 27 kb long flagellar operon. The frequency of SigD-ON motile cells is increased by the heteromeric transcription factor SwrA•DegU that activates the promoter.
View Article and Find Full Text PDFJ Biol Eng
January 2025
Department of Bioprocess Engineering, Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599, Stuttgart, Germany.
Background: In biomanufacturing of surface-active agents, such as rhamnolipids, excessive foaming is a significant obstacle for the development of high-performing bioprocesses. The exploitation of the inherent tolerance of Pseudomonas putida KT2440, an obligate aerobic bacterium, to microaerobic conditions has received little attention so far. Here low-oxygen inducible promoters were characterized in biosensor strains and exploited for process control under reduction of foam formation by low aeration and stirring rates during biosynthesis of rhamnolipids.
View Article and Find Full Text PDFInt J Biol Macromol
January 2025
College of Life Science, Sichuan Normal University, Chengdu 610066, Sichuan, China.
Inulin, a health-promoting dietary fiber, is efficiently metabolized by Weissella paramesenteroides YT175, a beneficial bacterium. The strain demonstrated a diauxic growth pattern within 48 h, reaching an optical density at 600 nm (OD) of approximately 1.5, accompanied by a significant decrease in pH to around 4.
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