Purpose: To develop an ultrafast and robust MR parameter mapping network using deep learning.
Theory And Methods: We design a deep learning framework called SuperMAP that directly converts a series of undersampled (both in k-space and parameter-space) parameter-weighted images into several quantitative maps, bypassing the conventional exponential fitting procedure. We also present a novel technique to simultaneously reconstruct T1rho and T2 relaxation maps within a single scan. Full data were acquired and retrospectively undersampled for training and testing using traditional and state-of-the-art techniques for comparison. Prospective data were also collected to evaluate the trained network. The performance of all methods is evaluated using the parameter qualification errors and other metrics in the segmented regions of interest.
Results: SuperMAP achieved accurate T1rho and T2 mapping with high acceleration factors (R = 24 and R = 32). It exploited both spatial and temporal information and yielded low error (normalized mean square error of 2.7% at R = 24 and 2.8% at R = 32) and high resemblance (structural similarity of 97% at R = 24 and 96% at R = 32) to the gold standard. The network trained with retrospectively undersampled data also works well for the prospective data (with a slightly lower acceleration factor). SuperMAP is also superior to conventional methods.
Conclusion: Our results demonstrate the feasibility of generating superfast MR parameter maps through very few undersampled parameter-weighted images. SuperMAP can simultaneously generate T1rho and T2 relaxation maps in a short scan time.
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http://dx.doi.org/10.1002/mrm.29411 | DOI Listing |
Magn Reson Med
August 2023
Biomedical Engineering, University of Michigan, Ann Arbor, Michigan, United States.
Purpose: Optimizing three-dimensional (3D) k-space sampling trajectories is important for efficient MRI yet presents a challenging computational problem. This work proposes a generalized framework for optimizing 3D non-Cartesian sampling patterns via data-driven optimization.
Methods: We built a differentiable simulation model to enable gradient-based methods for sampling trajectory optimization.
Magn Reson Med
January 2023
Electrical Engineering, University at Buffalo, State University of New York, Buffalo, New York, USA.
Purpose: To develop an ultrafast and robust MR parameter mapping network using deep learning.
Theory And Methods: We design a deep learning framework called SuperMAP that directly converts a series of undersampled (both in k-space and parameter-space) parameter-weighted images into several quantitative maps, bypassing the conventional exponential fitting procedure. We also present a novel technique to simultaneously reconstruct T1rho and T2 relaxation maps within a single scan.
In this study, we present a novel method to reconstruct the MR parametric maps from highly undersampled k-space data. Specifically, we utilize a nonlinear model to sparsely represent the unknown MR parameter-weighted images in high-dimensional feature space. Each image at a specific time point is assumed to belong to a low-dimensional manifold which is learned from training images created based on the parametric model.
View Article and Find Full Text PDFNeuroradiology
September 2021
Department of Radiology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan.
Purpose: To investigate whether Parkinson's disease (PD) can be differentiated from healthy controls and to identify neural circuit disorders in PD by applying a deep learning technique to parameter-weighted and number of streamlines (NOS)-based structural connectome matrices calculated from diffusion-weighted MRI.
Methods: In this prospective study, 115 PD patients and 115 healthy controls were enrolled. NOS-based and parameter-weighted connectome matrices were calculated from MRI images obtained with a 3-T MRI unit.
Magn Reson Imaging
November 2020
Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, USA; F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, USA. Electronic address:
Purpose: To develop a rapid T mapping protocol using optimized spiral acquisition, accelerated reconstruction, and model fitting.
Materials And Methods: A T-prepared stack-of-spiral gradient echo (GRE) pulse sequence was applied. A model-based approach joined with compressed sensing was compared with the two methods applied separately for accelerated reconstruction and T mapping.
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