is a rare orchid species of the tribe Malaxideae mainly distributed in tropical Asia. This is the only species of the genus Thouars which has been reported to occur in China. Despite the importance of this genus, previous molecular studies based on few markers have resulted in limited phylogenetic resolution. With the decline of habitats, the wild population of has decreased in recent years. In this study, we first reported the complete chloroplast (cp) genome of . The entire cp genome was determined to be 158,056 bp in length with overall GC content of 36.9%, containing a pair of inverted repeat regions (IRs) of 27,006 bp, separated by a large single-copy (LSC, 86,280 bp) and a small single-copy (SSC, 17,764 bp). A total of 133 unique genes were annotated, including 87 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The phylogenetic tree indicated that was a sister group of the genus and the epiphytic alliance with strong support.
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http://dx.doi.org/10.1080/23802359.2022.2111980 | DOI Listing |
BMC Plant Biol
January 2025
College of Forestry, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Background: Phaius Lour. (Collabieae, Orchidaceae) is a small genus consisting of about 45 species, with highly ornamental and medicinal values. However, the phylogenetic relationship of Phaius among Calanthe s.
View Article and Find Full Text PDFFront Genet
December 2024
College of Smart Agriculture, Chongqing University of Arts and Sciences, Chongqing, China.
Background: Zanthoxylum L., an important genus in the Rutaceae family, has great edible and medical values. However, the high degree of morphological similarity among species and the lack of sufficient chloroplast (cp) genomic resources have greatly impeded germplasm identification and phylogenetic analyses of
Methods: Here we assembled cp genomes of five widespread species (, , , and ) in China as a case study, comparative analysis of these assembled cp genomes.
Mitochondrial DNA B Resour
December 2024
School of Pharmacy, Liaoning University of Traditional Chinese Medicine, Dalian, China.
Thunb. (1784) is primarily distributed in eastern Asia, has a total length of 152,778 bp and consists of a large single copy (LSC) region of 84,517 bp, a small single copy (SSC) region of 18,277 bp, and two inverted repeat (IRs) regions of 24,992 bp . The GC content is 37.
View Article and Find Full Text PDFMitochondrial DNA B Resour
December 2024
Ministry of Education, Key Laboratory of Land Resources Evaluation and Monitoring in Southwest (Sichuan Normal University), Chengdu, China.
In this study, we studied the complete chloroplast (cp) genome of F. H. Chen & C.
View Article and Find Full Text PDFMitochondrial DNA B Resour
December 2024
Ningxia Technical College of Wine and Desertification Prevention, Yinchuan, Ningxia, China.
var. (2010), is a new variety of in Solanaceae. Here, we sequenced, assembled, and annotated the complete chloroplast (cp) genome of var.
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