K.M.Liu, L.B.Chen, H.F.Bai & L.H.Liu 2008, also called , belongs to the genus , Brassicaceae. As a plant with selenium enrichment ability, it has high development value. Here, we analyzed the chloroplast genome of . The complete chloroplast genome had a total size of 154,832 bp with a typical quadripartite structure, including a large single-copy region (LSC, 83,908 bp) and a small single-copy region (SSC, 17,938 bp), separated by a pair of inverted repeat regions (IRs, 26,493 bp). Genome annotation showed the chloroplast genome contained 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. A total of 143 SSRs were found in the chloroplast genome. Phylogenetic analysis showed that was closer to the and . This chloroplast genome resource will be useful for study of the phylogeny and evolution of in the future.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9427039PMC
http://dx.doi.org/10.1080/23802359.2022.2113752DOI Listing

Publication Analysis

Top Keywords

chloroplast genome
24
complete chloroplast
8
kmliu lbchen
8
lbchen hfbai
8
hfbai lhliu
8
single-copy region
8
genome
7
chloroplast
5
genome kmliu
4
lhliu brassicaceae
4

Similar Publications

Background: Tea-oil Camellia within the genus Camellia is renowned for its premium Camellia oil, often described as "Oriental olive oil". So far, only one partial mitochondrial genomes of Tea-oil Camellia have been published (no main Tea-oil Camellia cultivars), and comparative mitochondrial genomic studies of Camellia remain limited.

Results: In this study, we first reconstructed the entire mitochondrial genome of C.

View Article and Find Full Text PDF

The chloroplast (cp) genome is a widely used tool for exploring plant evolutionary relationships, yet its effectiveness in fully resolving these relationships remains uncertain. Integrating cp genome data with nuclear DNA information offers a more comprehensive view but often requires separate datasets. In response, we employed the same raw read sequencing data to construct cp genome-based trees and nuclear DNA phylogenetic trees using Read2Tree, a cost-efficient method for extracting conserved nuclear gene sequences from raw read data, focusing on the Aurantioideae subfamily, which includes Citrus and its relatives.

View Article and Find Full Text PDF

The major limiting factor of photosynthesis in C3 plants is the enzyme, rubisco which inadequately distinguishes between carbon dioxide and oxygen. To overcome catalytic deficiencies of Rubisco, cyanobacteria utilize advanced protein microcompartments, called the carboxysomes which envelopes the enzymes, Rubisco and Carbonic Anhydrase (CA). These microcompartments facilitate the diffusion of bicarbonate ions which are converted to CO by CA, following in an increase in carbon flux near Rubisco boosting CO fixation process.

View Article and Find Full Text PDF

Dodder (Cuscuta spp.), particularly the species Cuscuta chinensis, is a parasitic weed known for its ability to infest a broad spectrum of plant species, thereby significantly affecting the stability and functionality of native ecosystems (Zhang, Xu et al. 2021).

View Article and Find Full Text PDF

Species of the genus have the potential to be natural medicines and have industrial fibre production uses. Many species of this genus are morphologically similar and are difficult to distinguish, especially when their morphology is distorted. This dataset includes sequence information of several DNA regions isolated from the genome of , namely ITS (from the nuclear genome), , trnL-trnF, trnH-psbA, and (from the chloroplast genome) and phylogenetic analysis results based on the isolated sequences.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!