AI Article Synopsis

  • The study investigates essential genes and pathways involved in diabetes of the exocrine pancreas (DEP) by analyzing pancreatic tissue samples from 20 diabetic and 32 nondiabetic individuals.
  • Differentially expressed genes (DEGs) were identified, including 59 up-regulated and 3 down-regulated genes, with HLA-DRA highlighted as a central gene in the protein-protein interaction network.
  • The findings suggest that the immune system and infection-related pathways, particularly involving HLA-DRA, may be crucial in understanding the molecular mechanisms of DEP.

Article Abstract

This study aimed to identify potential essential genes and pathways in diabetes of the exocrine pancreas (DEP) and explore possible molecular mechanisms. The array dataset GSE76895 was downloaded from the Gene Expression Omnibus database. Pancreatic tissue samples from 20 Diabetes of the exocrine pancreas and 32 nondiabetic individuals were selected for analysis. GEO2R analyzed differentially expressed genes (DEGs) in the 2 groups. Gene ontology annotation, Kyoto Encyclopedia of Genes Genomes and Reactome pathway enrichment analyses and Gene Set Enrichment Analysis were performed in this study. Protein-protein interaction (PPI) networks were constructed using Cytoscape software, and core networks were identified using MCODE plugins. A total of 62 genes, including 59 up-regulated and 3 down-regulated genes, were differentially expressed in DEP samples compared with nondiabetic patients. PPI network with 53 nodes and 138 edges was established. HLA-DRA is identified as the central gene of the PPI network and maybe a marker gene for DEP. Furthermore, up-regulated DEGs are mainly enriched in pathways related to the immune system and infection. The results of this study suggest that HLA-DRA and immune system pathways may play essential roles in DEP.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9410602PMC
http://dx.doi.org/10.1097/MD.0000000000029781DOI Listing

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