Genome Assembly of the Polyclad Flatworm Prostheceraeus crozieri.

Genome Biol Evol

Centre for Life's Origins and Evolution, Department of Genetics, Evolution and Environment, University College London, London, WC1E 6BT, United Kingdom.

Published: September 2022

AI Article Synopsis

  • - Polyclad flatworms, like Prostheceraeus crozieri, are important for studying evolutionary traits due to their relative primitiveness compared to other flatworms.
  • - Researchers extracted high molecular weight DNA and sequenced the genome of P. crozieri, which is large (2.07 Gb) and highly repetitive (67.9%).
  • - The assembly includes 43,325 annotated genes and shows significant intron sizes and transposable elements, providing a valuable resource for future biological studies.

Article Abstract

Polyclad flatworms are widely thought to be one of the least derived of the flatworm classes and, as such, are well placed to investigate evolutionary and developmental features such as spiral cleavage and larval diversification lost in other platyhelminths. Prostheceraeus crozieri, (formerly Maritigrella crozieri), is an emerging model polyclad flatworm that already has some useful transcriptome data but, to date, no sequenced genome. We have used high molecular weight DNA extraction and long-read PacBio sequencing to assemble the highly repetitive (67.9%) P. crozieri genome (2.07 Gb). We have annotated 43,325 genes, with 89.7% BUSCO completeness. Perhaps reflecting its large genome, introns were considerably larger than other free-living flatworms, but evidence of abundant transposable elements suggests genome expansion has been principally via transposable elements activity. This genome resource will be of great use for future developmental and phylogenomic research.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9469890PMC
http://dx.doi.org/10.1093/gbe/evac133DOI Listing

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