AI Article Synopsis

  • The study focuses on a specific protein family (TGACG sequence-specific binding protein) involved in hormone synthesis and stress response in potatoes, particularly in relation to bacterial wilt disease.
  • A total of 42 members from this protein family were identified within the potato genome, showing distinct evolutionary relationships and varied expression across different developmental stages and tissues.
  • Experimental results indicate that one representative member's expression is significantly boosted by bacterial infection and certain plant hormones, suggesting its crucial role in the potato's defense mechanisms against bacterial wilt.

Article Abstract

is one of the members of TGACG sequence-specific binding protein family, which plays a crucial role in the regulated course of hormone synthesis as a stress-responsive transcription factor (TF). Little is known, however, about its implication in response to bacterial wilt disease in potato () caused by . Here, we performed an identification and analysis of the members of the family based on the whole genome data of potato. In total, 42 were predicted to be distributed on four chromosomes in potato genome. Phylogenetic analysis showed that the proteins of could be divided into six sub-families. We found that many of these genes have more than one exon according to the conserved motif and gene structure analysis. The heat map inferred that are generally expressed in different tissues which are at different stages of development. Genomic collinear analysis showed that there are homologous relationships among potato, tomato, pepper, Arabidopsis, and tobacco genes. Cis-element analysis predicted that there may be many cis-acting elements related to abiotic and biotic stress upstream of promoter including plant hormone response elements. A representative member was selected to investigate the potential function of the genes for further analysis. Quantitative real-time polymerase chain reaction (qRT-PCR) assays indicated that the expression of the was significantly induced by infection and upregulated by exogenous salicylic acid (SA), abscisic acid (ABA), gibberellin 3 (GA), and methyl jasmonate (MeJA). The results of yeast one-hybrid (Y1H) assay showed that regulates BRI1-associated receptor kinase 1 () expression. Thus, our study provides a theoretical basis for further research of the molecular mechanism of the gene of potato tolerance to bacterial wilt.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9360622PMC
http://dx.doi.org/10.3389/fgene.2022.894844DOI Listing

Publication Analysis

Top Keywords

bacterial wilt
12
potato
6
analysis
6
genome-wide analysis
4
genes
4
analysis genes
4
genes reveals
4
reveals critical
4
critical role
4
role enhanced
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!