The complete mitochondrial genomes and their rearrangement patterns can provide useful information for inferring evolutionary history of organisms. Aphids are one of the insect groups with some unique mitogenome features. In this study, to examine whether some features in aphid mitogenomes are independent species-specific evolutionary events or clade-specific events at certain taxonomic levels, we sequenced three new aphid mitogenomes (Hormaphidinae: , ; Lachninae: ) and compared them with all known aphid mitogenomes. The three mitogenomes are 16,059-17,033 bp in length, with a set of 37 typical mitochondrial genes, a non-coding control region and a tandem repeat region. The gene orders of them are all highly rearranged. Within the subfamily Hormaphidinae, the presence of repeat region and mitogenome rearrangement in Cerataphidini species but not in the other two tribes indicate that these may be Cerataphidini-specific features. The same gene rearrangement pattern in the two Lachninae species, (Tuberolachnini) and (Stomaphidini), supports that this feature should be at least derived from the common ancestor of two tribes. Overall, our data and analyses provide new insights into the evolutionary patterns of gene rearrangement and repeat region in aphid mitogenomes, and further corroborate the potential role of gene rearrangement in elucidating the evolutionary history of different insect lineages.
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http://dx.doi.org/10.3390/ani12151970 | DOI Listing |
Mitochondrial DNA B Resour
November 2024
Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.
We sequenced the complete mitochondrial genome of the aphid It is 16,828 bp long and includes 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosome RNA genes (rRNAs), a control region, and a repeat region. The control region contains a 273-bp repeat motif repeated 2.3 times.
View Article and Find Full Text PDFInsects
May 2024
Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China.
Using Illumina sequencing technology, we generated complete mitochondrial genomes (mitogenomes) of three constituent species of the aphid genus Koch, (Blanchard), Ghulamullah, and (Geoffroy). The sizes of the mitogenomes range from 15,306 to 15,410 bp, primarily due to variations in the length of non-coding regions. The mitogenomes consist of 37 coding genes arranged in the order of the ancestral insect mitogenome, a control region, and a repeat region between and According to the COI-based analysis, one previously reported mitogenome of should be assigned to .
View Article and Find Full Text PDFMitochondrial DNA B Resour
December 2023
EntoCode Co, Seoul, Korea.
In this study, the complete mitogenome of the entomopathogenic fungus 15 R, which is highly virulent to aphids and was isolated from Korean soil, was assembled and annotated for three ATP synthase subunits (6, 8, and 9), three cytochrome oxidase subunits (1, , and 3), apocytochrome b (), seven subunits of NADH dehydrogenase (12344L5, and 6), two ribosomal RNAs ( and ), and 19 tRNA genes. Five genes were carrying a total of eight introns, and they may encode ribosomal protein S3, LAGLIDADG and GIY-YIG endonucleases. Phylogenetic analysis based on the mitochondrial nucleotide sequence confirmed that the 15 R is a member of the Clavicipitaceae, and is closely related to the species and The mtDNA base sequence of the 15 R strain reported in this study is thought to be useful for biological resource genetic data.
View Article and Find Full Text PDFBiochem Genet
March 2024
School of Life Science, Shanxi University, Taiyuan, Shanxi, China.
Mol Biol Rep
March 2023
Department of Entomology and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, 100193, Beijing, China.
Background: Species in the subfamily Aphidiinae from the Braconidae of Hymenoptera are endoparasitic wasps that exclusively utilize aphids as hosts. Some Aphidiinae species are widely used as biological agents. However, there were only one species with determined complete mitochondrial genome from this subfamily.
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