The fungal genus includes plant pathogens that cause substantial economic damage to horticultural, ornamental, and fruit tree crops worldwide. Here, we conducted a systematic literature review to retrieve and analyze the metadata on the influence of temperature on four biological processes: (i) mycelial growth, (ii) conidial germination, (iii) infection by conidia, and (iv) sporulation. The literature review considered 118 papers (selected from a total of 1,641 papers found with the literature search), 19 species belonging to eight clades (acutatum, graminicola, destructivum, coccodes, dematium, gloeosporioides, and orbiculare), and 27 host plants (alfalfa, almond, apple, azalea, banana, barley, bathurst burr, blueberry, celery, chilli, coffee, corn, cotton, cowpea, grape, guava, jointvetch, lentil, lupin, olive, onion, snap bean, spinach, strawberry, tomato, watermelon, and white bean). We used the metadata to develop temperature-dependent equations representing the effect of temperature on the biological processes for the different clades and species. Inter- and intra-clades similarities and differences are analyzed and discussed. A multi-factor cluster analysis identified four groups of clades with similar temperature dependencies. The results should facilitate further research on the biology and epidemiology of species and should also contribute to the development of models for the management of anthracnose diseases.
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http://dx.doi.org/10.3389/fpls.2022.953760 | DOI Listing |
Int J Syst Evol Microbiol
January 2025
Independent Scholar, Singapore, Singapore.
Both the genera and are members of the family . Their type species, both Sanger_33 and ASD5720, were isolated from human faeces. A comparison of their 16S rRNA gene sequences revealed 100% similarity, suggesting their close relatedness and the possibility of belonging to the same species.
View Article and Find Full Text PDFEcol Evol
January 2025
Institute of Sericulture, Applied Technology R and D Center for Special Sericulture of Hebei Province Universities Institute of Sericulture, Chengde Medical University Chengde China.
A new species of the genus Microcosmus was described in this study based on specimens collected from the coast of Xilian Town, Xuwen County, Zhanjiang, Guangdong Province, China. The morphological and molecular characteristics of this new species, sp. z YZ-2024 (YZ-2024), distinguish it from other sea squirts.
View Article and Find Full Text PDFFront Microbiol
December 2024
Meat Safety and Quality Research Unit, U.S. Department of Agriculture, U.S. Meat Animal Research Center, Clay Center, NE, United States.
Recent application of whole genome sequencing in the investigation of foodborne illness outbreaks has facilitated the identification of Reoccurring, Emerging, or Persistent (REP) bacterial strains that have caused illnesses over extended periods of time. Here, the complete genomes of two O157:H7 (EcO157) outbreak strains belonging to REPEXH01 and REPEXH02, respectively, were sequenced and annotated. Comparative genomics and phenotypic analyses were carried out to identify REP-associated traits.
View Article and Find Full Text PDFSyst Biol
December 2024
Department of Plant Pathology, Nanjing Agricultural University, Nanjing 210095, China.
The phylum Nematoda represents one of the most cosmopolitan and abundant metazoan groups on Earth. In this study, we reconstructed the phylogenomic tree for phylum Nematoda. A total of 60 genomes, belonging to eight nematode orders, were newly sequenced, providing the first low-coverage genomes for the orders Dorylaimida, Mononchida, Monhysterida, Chromadorida, Triplonchida, and Enoplida.
View Article and Find Full Text PDFFront Vet Sci
December 2024
Laboratory of Multiomics Research, Scientific Research Institute for Systems Biology and Medicine, Federal Service on Consumer Rights Protection and Human Well-Being Surveillance, Moscow, Russia.
Introduction: Small mammals, especially rodents and bats, are known reservoirs of zoonotic viruses, but little is known about the viromes of insectivorous species including hedgehogs (order Eulipotyphla), which often live near human settlements and come into contact with humans.
Methods: We used high-throughput sequencing and metaviromic analysis to describe the viromes of 21 hedgehogs (Erinaceus sp.) sampled from summer 2022 to spring 2023.
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