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Comprehensive Analysis for GRF Transcription Factors in Sacred Lotus (). | LitMetric

Comprehensive Analysis for GRF Transcription Factors in Sacred Lotus ().

Int J Mol Sci

Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.

Published: June 2022

Sacred lotus () is an aquatic perennial plant with essential food, ornamental, and pharmacological value. Growth-regulating factor (GRF) is a transcription factor (TF) family that plays an important role in regulating the growth and development of plants. In this study, a comprehensive analysis of the GRF family in was performed, and its role in development was studied. A total of eight GRF genes were identified in the genome. Phylogenetic analysis divided the 38 GRF genes into six clades, while the NuGRFs only contained five clades. The analyses of gene structures, motifs, and cis-acting regulatory elements of the GRF gene family were performed. In addition, the chromosome location and collinearity were analyzed. The expression pattern based on transcriptomic data and real-time reverse transcription-quantitative PCR (qRT-PCR) revealed that the GRF genes were expressed in multiple organs and were abundant in actively growing tissues, and the expression levels decreased as the age of increased. Then, 3D structures of the NuGRF proteins were predicted by homology modeling. Finally, the subcellular localization of GRF1 was ascertained in the tobacco leaf through a vector. Therefore, this study provides a comprehensive overview of the GRF TF family in .

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9224289PMC
http://dx.doi.org/10.3390/ijms23126673DOI Listing

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