We show that properties of molecules with low-frequency modes calculated with density functional approximations (DFAs) suffer from spurious oscillations along the nuclear displacement coordinate due to numerical integration errors. Occasionally, the problem can be alleviated using extensive integration grids that compromise the favorable cost-accuracy ratio of DFAs. Since spurious oscillations are difficult to predict or identify, DFAs are exposed to severe performance errors in IR and Raman intensities and frequencies or vibrational contributions to any molecular property. Using Fourier spectral analysis and digital signal processing techniques, we identify and quantify the error due to these oscillations for 45 widely used DFAs. LC-BLYP and BH&H are revealed as the only functionals showing robustness against the spurious oscillations of various energy, dipole moment, and polarizability derivatives with respect to a nuclear displacement coordinate. Given the ubiquitous nature of molecules with low-frequency modes, we warrant caution in using modern DFAs to simulate vibrational spectroscopies.
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http://dx.doi.org/10.1021/acs.jpclett.2c01278 | DOI Listing |
Sensors (Basel)
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School of Mechanical, Aerospace & Civil Engineering, University of Sheffield, Sheffield S1 3JD, UK.
Stress wave dispersion can result in the loss or distortion of critical high-frequency data during high-strain-rate material tests or blast loading experiments. The purpose of this work is to demonstrate the benefits of correcting stress wave dispersion in split-Hopkinson pressure bar experiments under various testing situations. To do this, an innovative computational algorithm, SHPB_Processing.
View Article and Find Full Text PDFSmall Methods
January 2025
Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, TN, TN 37830, USA.
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View Article and Find Full Text PDFNPJ Parkinsons Dis
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Champalimaud Research and Clinical Centre, Champalimaud Foundation, Av. Brasília, 1400-038, Lisboa, Portugal.
Resting tremor (RT) is a Parkinson's disease (PD) symptom with an unclear relationship to the dopaminergic system. We analysed data from 432 subjects from the Parkinson's Progression Markers Initiative, 57 additional PD patients and controls and 86 subjects referred for dopamine transporter single-photon emission computed tomography (DaT-SPECT). Caudate binding ratio (CBR), but not putamen binding ratio, was higher in RT patients.
View Article and Find Full Text PDFData Brief
December 2024
Chair of Aerodynamics and Fluid Mechanics, Technical University of Munich, Boltzmannstr. 15, 85748 Garching, Germany.
Common validation and verification test cases for compressible flow solvers are only one- or two-dimensional. Such flows, however, are inherently three-dimensional. The provided data contains simulation results of genuine three-dimensional Riemann problems computed with the open-source compressible flow solver ALPACA.
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