Source Apportionment (SA) techniques are widely used for identifying key sources of air pollution, thereby providing critical inputs for policy measures. Positive Matrix Factorisation (PMF) (Paatero and Tapper, 1994) is a widely used SA technique. PMF uses the speciated concentration data (X) collected over several days and factorises it into source contribution (G) and source profile (F) matrices, albeit under positivity constraint. Towards this end, it involves solving an optimisation problem where the elements of X are weighted by the inverse of the standard deviations of the corresponding errors introduced during the sampling and chemical analysis process. Thus, PMF implicitly assumes that the errors in different elements of the X matrix are uncorrelated. This assumption may not hold since the sampling, and chemical analysis steps deployed in any data-collection campaign will inevitably lead to correlated errors. While there are other existing Non-Negative Matrix Factorisation (NMF) methods in literature that can be potentially used for SA, these also make various restrictive assumptions about the error covariance structure. In this work, we propose a new method called Generalised Non-Negative Matrix Factorisation (GNMF) to fill this gap. In particular, the proposed method is able to incorporate any error covariance matrix without making any restrictive assumptions on its structure. Towards this end, we integrate the full error covariance matrix in the objective function to be minimised to obtain F and G matrices. We derive the corresponding update rules for obtaining these matrices iteratively. To ensure non-negativity, we extend the multiplicative and projected gradient-based ideas available in NMF literature to the proposed GNMF approach. The proposed method subsumes various NMF methods available in literature as special cases. The utility of the proposed approach is demonstrated by comparing its performance with other methods on an SA problem using a dataset derived from field measurements.
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http://dx.doi.org/10.1016/j.scitotenv.2022.156294 | DOI Listing |
J Hazard Mater
December 2024
Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China; School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China.
This study quantified heavy metal (HM) pollution risks in mining site soils to provide targeted solutions for environmental remediation. Focusing on As waste mine sites in Yunnan, we utilised multiple indices and a positive matrix factorisation model to assess and quantify ecological health risks. Our ecological risk assessment distinguished between environmental and biological factors.
View Article and Find Full Text PDFJ Electromyogr Kinesiol
December 2024
Auckland Bioengineering Institute & Department of Engineering Science and Biomedical Engineering, University of Auckland, Auckland, New Zealand; Department of Exercise Sciences, University of Auckland, Auckland, New Zealand.
This study investigates the effect of different normalisation methods on muscle synergy extraction from EMG data collected while walking in typically developing young people. Six methods were evaluated: Raw, Within-Trial Maximum, Inter-Trial Maximum, Task-Specific Maximum, Magnitude Percentile, and Unit Variance. Eighteen healthy children aged 8-15 participated, performing walking trials while their EMG signals were recorded and processed.
View Article and Find Full Text PDFMotivation: Many tumours show deficiencies in DNA damage response (DDR), which influence tumorigenesis and progression, but also expose vulnerabilities with therapeutic potential. Assessing which patients might benefit from DDR-targeting therapy requires knowledge of tumour DDR deficiency status, with mutational signatures reportedly better predictors than loss of function mutations in select genes. However, signatures are identified independently using unsupervised learning, and therefore not optimised to distinguish between different pathway or gene deficiencies.
View Article and Find Full Text PDFSci Total Environ
December 2024
State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences, Beijing 100012, China.
Eur J Appl Physiol
November 2024
School of Health Sciences, Western Sydney University, Locked Bag 1797, Penrith, Sydney, NSW, 2751, Australia.
Purpose: The aim of the current study was to determine whether gait control (muscle synergies) or gait stability (margin of stability (MoS)) were different between younger and older adults when walking on level or downhill slopes. Further, it sought to determine associations between either age or physical activity with muscle synergy widths.
Methods: Ten healthy younger (28.
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