AI Article Synopsis
- This study investigated the circadian clock's effect on gene expression in cultured human corneal endothelial cells (cHCECs) to understand its role in cell function.
- Researchers used a bioluminescence reporter to monitor circadian rhythms in cHCECs and performed RNA sequencing to identify genes with rhythmic expression.
- The results showed that cHCECs have a strong circadian clock, with 329 genes linked to important cellular processes displaying rhythmic expression, suggesting that this regulation helps the cells adapt to daily environmental changes.
Article Abstract
Purpose: To investigate circadian clock oscillation and circadian global gene expression in cultured human corneal endothelial cells (cHCECs) to elucidate and assess the potential function of circadian regulation in HCECs.
Methods: In this study, we introduced a circadian bioluminescence reporter, Bmal1:luciferase (Bmal1:luc), into cHCECs and subsequently monitored real-time bioluminescence rhythms. RNA-sequencing data analysis was then performed using sequential time-course samples of the cHCECs to obtain a comprehensive understanding of the circadian gene expression rhythms. The potential relevance of rhythmically expressed genes was then assessed by systematic approaches using functional clustering and individual gene annotations.
Results: Bmal1:luc bioluminescence exhibited clear circadian oscillation in the cHCECs. The core clock genes and clock-related genes showed high-amplitude robust circadian messenger RNA (mRNA) expression rhythms in cHCECs after treatment with dexamethasone, and 329 genes that exhibited circadian mRNA expression rhythms were identified (i.e., genes involved in various physiological processes including glycolysis, mitochondrial function, antioxidative systems, hypoxic responses, apoptosis, and extracellular matrix regulation, which represent the physiological functions of HCECs).
Conclusions: Our findings revealed that cHCECs have a robust and functional circadian clock, and our discovery that a large number of genes exhibit circadian mRNA expression rhythms in cHCECs suggests a potential contribution of circadian regulation to fine-tune HCEC functions for daily changes in the environment.
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| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123520 | PMC |
| http://dx.doi.org/10.1167/iovs.63.5.16 | DOI Listing |
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