Genetic Diversity of from in Java Island Based on Ribosomal Regions ITS1/ITS2 and D1/D2.

Mycobiology

Laboratory of Microbiology, Faculty of Biology, Universitas Gadjah Mada, Jl. Teknika Selatan, Sekip Utara, Yogyakarta, Indonesia.

Published: February 2022

is commonly found as amylolytic fungi in fermentation. However, its diversity is rarely reported despite being often used for food production in Southeast Asia. This research aims to analyze the genetic diversity and the distribution pattern of . from in Java Island, Indonesia. We isolated the fungus from samples obtained from producing centers in Bandung, Sumedang, Muntilan, Blora, Yogyakarta, and Bondowoso. The obtained isolates were molecularly identified based on the ribosomal regions ITS1/ITS2 and D1/D2, then analyzed for phylogenetic tree reconstruction, genetic distance, genetic variation, and haplotype networking. Six isolates showed specific morphological traits of . However, phylogenetic tree reconstruction on the ribosomal genes showed that the isolates were grouped into two different clades related to two species. Clade A included BDG, SMD, and MTL isolates related to . whereas clade B included YOG, BLR, and BDS isolates related to The genetic distances between clades for ITS1/ITS2 and D1/D2 were 0.6145 and 0.1556, respectively. In conclusion, we confirmed the genetic diversity of molds from in Java Island and showed that the isolates are not only related to as reported before.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067998PMC
http://dx.doi.org/10.1080/12298093.2022.2028436DOI Listing

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