While performing under mechanical loads , polyproteins are vitally involved in cellular mechanisms such as regulation of tissue elasticity and mechano-transduction by unfolding their comprising domains and extending them. It is widely thought that the process of sequential unfolding of polyproteins follows an exponential kinetics as the individual unfolding events exhibit identical and identically distributed (iid) Poisson behavior. However, it was shown that under high loads, the sequential unfolding kinetics displays nonexponential kinetics that alludes to aging by a subdiffusion process. Statistical order analysis of this kinetics indicated that the individual unfolding events are not iid, and cannot be defined as a Poisson (memoryless) process. Based on numerical simulations it was argued that this behavior becomes less pronounced with lowering the load, therefore it is to be expected that polyproteins unfolding under lower forces will follow a Poisson behavior. This expectation serves as the motivation of the current study, in which we investigate the effect of force lowering on the unfolding kinetics of Poly-L under varying loads, specifically high (150, 100 pN) and moderate-low (45, 30, 20 pN) forces. We found that a hierarchy among the unfolding events still exists even under low loads, again resulting in nonexponential behavior. We observe that analyzing the dwell-time distributions with stretched-exponentials and power laws give rise to different phenomenological trends. Using statistical order analysis, we demonstrated that even under the lowest load, the sequential unfolding cannot be considered as iid, in accord with the power law distribution. Additional free energy analysis revealed the contribution of the unfolded segments elasticity that scales with the force on the overall one-dimensional contour of the energy landscape, but more importantly, it discloses the hierarchy within the activation barriers during sequential unfolding that account for the observed nonexponentiality.
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http://dx.doi.org/10.1016/j.crstbi.2022.04.003 | DOI Listing |
Polymers (Basel)
December 2024
Yunnan Provincial Key Laboratory of Wood Adhesives and Glued Products, Southwest Forestry University, Kunming 650224, China.
Tung oil pressing generates a substantial amount of tung cake waste rich in protein, which can be used to develop a novel wood protein adhesive. This study determined the optimal alkali treatment parameters based on NaOH concentration, reaction temperature, and reaction time. Potassium permanganate (KMnO) and methyl trimethoxy silane (MTMS) were then sequentially added for cross-linking modification to achieve the optimal preparation process for the tung cake protein adhesive.
View Article and Find Full Text PDFJ Colloid Interface Sci
December 2024
State Key Laboratory of Separation Membranes and Membrane Processes/National Center for International Joint Research on Separation Membranes, Tiangong University, Tianjin 300387, China; School of Textile Science and Engineering, Tiangong University, Tianjin 300387, China. Electronic address:
Developing next generation batteries necessitates a paradigm shift in the way to engineering solutions for materials challenges. In comparison to traditional organic liquid batteries, all-solid-state batteries exhibit some significant advantages such as high safety and energy density, yet solid electrolytes face challenges in responding dimensional changes of electrodes driven by mass transport. Herein, the critical mechanical parameters affecting battery cycling duration are evaluated based on Spearman rank correlation coefficient, decoupling them into strength, ductility, stiffness, toughness, elasticity, etc.
View Article and Find Full Text PDFiScience
December 2024
Chemical and Biological Engineering, Princeton University, 50 Olden St, Princeton, NJ 08540, USA.
Global warming concerns have led to emission regulations and various incentives for low-carbon technologies. Energy system models, which are used to examine how investments affect our ability to meet energy demand, are typically based on two assumptions: key parameters are assumed to be known deterministically and a multi-period energy transition plan is determined at one point in time. We argue that for a systematic generation and analysis of energy transition pathways, these assumptions should be relaxed and, accordingly, we propose methods to achieve that.
View Article and Find Full Text PDFBiochem J
December 2024
Department of Biochemistry, Case Western Reserve University School of Medicine, Cleveland, OH, U.S.A.
Conditions of endoplasmic reticulum (ER) stress reduce protein synthesis by provoking translation regulation, governed by the eIF2α kinase PERK. When PERK is inhibited during ER stress, retention of a selective subset of glycoproteins occurs, a phenomenon we termed selective ER retention (sERr). sERr clients are enriched with tyrosine kinase receptors (RTKs), which form large molecular weight disulfide bonded complexes in the ER.
View Article and Find Full Text PDFJ Org Chem
December 2024
Department of Chemistry & Frontier Research Center on Fundamental and Applied Sciences of Matters, National Tsing Hua University, Hsinchu 300, Taiwan.
A synthetic method was developed for the generation of a quaternary carbon center in carbonyl compounds. This innovative process involved the reaction of α-thiolate lactones and cycloalkanones with two equivalents of arynes in acetonitrile to give α,α-diarylated products in 63-85% yields at 25 °C. The reaction unfolds through an unconventional domino process, encompassing sequential 1,2-elimination, 1,2-nucleophilic addition, 1,4-proton transfer, the second 1,2-nucleophilic addition, interrupted Pummerer rearrangement, intramolecular spirocyclization, and sulfonium ring-opening.
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