Characterization and expression of the gene family in .

Genome

Department of Biology, Concordia University, 7141 Sherbrooke W., Montreal, QC H4B 1R6, Canada.

Published: June 2022

AI Article Synopsis

  • Pirins are nuclear bicupin proteins found in plants, part of the larger cupin superfamily, and are linked to stress response pathways in Arabidopsis.* ! -
  • This study aimed to identify and correct annotations for the pirin gene family within a genome, revealing a total of 18 genes that exhibit tissue-specific expression and responses to various environmental stresses.* ! -
  • The research also discovered that similar pirin gene families exist in other monocots and one dicot, suggesting a broader significance in plant stress responses across species.* !

Article Abstract

Pirins are nuclear bicupin proteins, encoded by genes that are one of several gene families that comprise the cupin superfamily in plants. genes have been implicated in stress response pathways studied in Arabidopsis and At- has been shown to interact with the heterotrimeric G-protein alpha subunit (GPA1). The aim of this study was to identify the members of the gene family in to correct their annotations in the whole genome, and gain an insight into their tissue-specific expression as well as their response to abiotic and biotic stresses. The gene family in is comprised of 18 genes that represent six paralogous gene copies, each having an A, B, and D homeolog. Expression analysis of the genes in Illumina RNA-seq libraries, which included sampling from differing tissue types as well as abiotic and biotic stresses, indicates that the members of the gene family have specialized expression and play a role in stress responses. gene families are also identified in other monocots including , and the dicot

Download full-text PDF

Source
http://dx.doi.org/10.1139/gen-2021-0094DOI Listing

Publication Analysis

Top Keywords

gene family
16
gene families
8
members gene
8
abiotic biotic
8
biotic stresses
8
gene
7
characterization expression
4
expression gene
4
family
4
family pirins
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!