The variability of nuclear DNA content of different Pelargonium species estimated by flow cytometry.

PLoS One

Julius Kühn Institute (JKI)-Federal Research Centre of Cultivated Plants, Institute for Breeding Research on Horticultural Crops, Quedlinburg, Germany.

Published: May 2022

AI Article Synopsis

  • Pelargonium is a diverse plant genus primarily found in South Africa, divided into four subgenera and 16 sections based on chromosome characteristics.
  • A study using flow cytometry estimated the DNA content of 96 Pelargonium accessions from 60 species, revealing a range from 0.84 pg to 6.69 pg, highlighting significant variability within the genus.
  • Some species showed differences in DNA content based on tissue type, emphasizing the need for careful sample selection for accurate genomic analysis, which contributes to broader genetic studies in the German Gene Bank.

Article Abstract

Pelargonium is a versatile genus mainly from the Cape Region, South Africa. The genus is divided into four subgenera and 16 sections characterized by several groups of chromosomes sizes and numbers. The DNA content of species from all subgenera and sections of Pelargonium, except for the sections Subsucculentia and Campylia was estimated using flow cytometry. Nuclei of Pelargonium samples (leaf or petal tissue) and an internal plant standard (leaf tissue) were isolated together and stained with propidium iodide. The DNA content was estimated providing that the 2C peaks of sample and standard be in linearity in the flow cytometer histograms. In total, 96 Pelargonium accessions of 60 species (22 Pelargonium species for the first time) were analyzed. The 2C DNA content ranged from 0.84 pg (P. longifolium, section Hoarea) to 6.69 pg (P. schizopetalum, section Magnistipulacea) and the corresponding 1Cx DNA content from 0.42 pg (P. longifolium) to 1.72 pg (P. transvaalense. This demonstrates the high plasticity within the genus Pelargonium. Some species, such as P. peltatum accessions revealed a pronounced endopolyploidization in leaves but not in petals underlining the importance to choose the right tissue as sample for the flow cytometry analysis. The reported genome sizes are a step forward towards the characterization of the Pelargonium collection within the German Gene Bank for Ornamental Plants and a valuable base for future sequencing programs of the Pelargonium genomes.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9049363PMC
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0267496PLOS

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