Relationship between fitness and heterogeneity in exponentially growing microbial populations.

Biophys J

Politecnico di Torino, Corso Duca degli Abruzzi, 24, I-10129, Torino, Italy; Italian Institute for Genomic Medicine, IRCCS Candiolo, SP-142, I-10060, Candiolo (TO), Italy; Istituto di Nanotecnologia (CNR-NANOTEC), Consiglio Nazionale delle Ricerche, I-00185 Roma, Italy. Electronic address:

Published: May 2022

AI Article Synopsis

  • Scientists found that many bacteria use similar ways to create energy, even if they are very different from each other.
  • They studied how these bacteria grow and discovered that their growth and differences in how they use energy are connected.
  • Their research suggests that there’s a balance between how fast bacteria grow and how different they are from each other, especially when they have plenty of food around.

Article Abstract

Despite major environmental and genetic differences, microbial metabolic networks are known to generate consistent physiological outcomes across vastly different organisms. This remarkable robustness suggests that, at least in bacteria, metabolic activity may be guided by universal principles. The constrained optimization of evolutionarily motivated objective functions, such as the growth rate, has emerged as the key theoretical assumption for the study of bacterial metabolism. While conceptually and practically useful in many situations, the idea that certain functions are optimized is hard to validate in data. Moreover, it is not always clear how optimality can be reconciled with the high degree of single-cell variability observed in experiments within microbial populations. To shed light on these issues, we develop an inverse modeling framework that connects the fitness of a population of cells (represented by the mean single-cell growth rate) to the underlying metabolic variability through the maximum entropy inference of the distribution of metabolic phenotypes from data. While no clear objective function emerges, we find that, as the medium gets richer, the fitness and inferred variability for Escherichia coli populations follow and slowly approach the theoretically optimal bound defined by minimal reduction of variability at given fitness. These results suggest that bacterial metabolism may be crucially shaped by a population-level trade-off between growth and heterogeneity.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9199093PMC
http://dx.doi.org/10.1016/j.bpj.2022.04.012DOI Listing

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