Intensified urbanization has been occurring in the eastern region of China in recent decades, and excessive industrial and household sewage has been discharged into lakes and reservoirs, which has directly lowered water quality and destructed the functions of aquatic ecosystems. Lakes and reservoirs are typically drinking water sources supplying water for metropolitan areas as well as large- and medium-sized cities. Chromophoric dissolved organic matter (CDOM) is the colored fraction of DOM, and its source and optical composition strongly affect water supply safety and the health of surrounding citizens. In April 2021, we collected 68 samples from Reservoir Changtan (=11), Lake Taihu (=25), Lake Hongze (=18), and Lake Gaoyou (=14), and we further carried out 28 days of laboratory bio-incubation, together with optical measurements and parallel factor analysis (EEMs-PARAFAC) to analyze the bio-degradability (BDOC), sources, and optical composition of CDOM in these waters. The results showed that after 28 days of laboratory bio-incubation, the bioavailability of dissolved organic carbon (BDOC) of the four lakes and reservoirs were all higher than 50%. PARAFAC results showed that CDOM collected from the four lakes was composed of four fluorescent components, including a terrestrial humic-like C1, a tryptophan-like C2, and tyrosine-like C3 and C4. Protein-like components (C2, C3, and C4) contributed importantly to the CDOM pool in the four waterbodies, and in Lake Hongze the contribution of C2-C4 was as high as (90.0±2.2)%. In Lake Hongze, total phosphorus (TP) correlated closely with C1-C3, indicating that those components can be used to trace the variability of TP. Among the four waterbodies, was positively correlated with DOC (=0.96, <0.01), indicating that can be used to estimate the dynamics of DOC in these waters. In Lake Taihu, we found a low level of humification index (HIX) and a high level of biological index (BIX), indicating that autochthonous substances contributed importantly to the CDOM pool in this lake. In comparison, allochthonous sources contributed importantly to the CDOM pool in the remaining three waters. The enhanced monitoring of the discharge of industrial and agricultural effluents in the upstream watersheds of the four waters can help to protect the water quality and maintain healthy aquatic ecosystems.

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