Purpose: X-ray computed tomography (CT) has become a convenient and efficient clinical medical technique. However, in the presence of metal implants, CT images may be corrupted by metal artifacts. The metal artifact reduction (MAR) methods based on deep learning are mostly supervised methods trained with labeled synthetic-artifact CT images. However, this causes the neural network to be biased toward learning specific synthetic-artifact patterns and leads to a poor generalization for unlabeled real-artifact CT images. In this study, a semi-supervised learning method of latent features based on convolutional neural networks (SLF-CNN) is developed to remove metal artifacts while ensuring a good generalization ability for real-artifact CT images.
Methods: The proposed semi-supervised method extracts CT image features in alternate iterations of a synthetic-artifact learning stage and a real-artifact learning stage. In the synthetic-artifact learning stage, SLF-CNN is fed with paired synthetic-artifact CT images and is constrained using mean-squared-error (MSE) loss and perceptual loss in a supervised learning fashion. In the real-artifact learning stage, the network weight is updated by minimizing the error between the pseudo-ground truths and the predicted latent features. The feature level pseudo-ground truths are obtained by modeling latent features using the Gaussian process. The overall framework of SLF-CNN adopts an encoder-decoder structure. The encoder is composed of artifact information collection groups to map the input artifact-affected synthetic-artifact CT images and real-artifact CT images into latent features. The decoder is composed of stacked ResNeXt blocks and is responsible for decoding latent features with high-level semantic information to reconstruct artifact-free CT images. The performance of the proposed method is evaluated through contrast experiments and ablation experiments.
Results: The contrast experimental results indicate that the artifact-free CT images obtained by SLF-CNN have good metrics values, which are close to or better than those of typical supervised MAR methods. The metal artifacts in artifact-affected CT images are eliminated and the tissue structure details are preserved using SLF-CNN. The ablation experiment shows that adding real-artifact CT images greatly improves the generalization ability of the network.
Conclusions: The proposed semi-supervised learning method of latent features for MAR effectively suppresses metal artifacts and improves the generalization ability of the network.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1002/mp.15633 | DOI Listing |
Proc Natl Acad Sci U S A
January 2025
Department of Molecular & Cellular Biosciences, University of Cincinnati, Cincinnati, OH 45267.
TGFβ family ligands are synthesized as precursors consisting of an N-terminal prodomain and C-terminal growth factor (GF) signaling domain. After proteolytic processing, the prodomain typically remains noncovalently associated with the GF, sometimes forming a high-affinity latent procomplex that requires activation. For the TGFβ family ligand anti-Müllerian hormone (AMH), the prodomain maintains a high-affinity interaction with its GF that does not render it latent.
View Article and Find Full Text PDFGigascience
January 2025
School of Computer Science, Hunan University of Technology, Zhuzhou 412007, Hunan, China.
Background: The accurate deciphering of spatial domains, along with the identification of differentially expressed genes and the inference of cellular trajectory based on spatial transcriptomic (ST) data, holds significant potential for enhancing our understanding of tissue organization and biological functions. However, most of spatial clustering methods can neither decipher complex structures in ST data nor entirely employ features embedded in different layers.
Results: This article introduces STMSGAL, a novel framework for analyzing ST data by incorporating graph attention autoencoder and multiscale deep subspace clustering.
Brief Bioinform
November 2024
Department of Electronic Engineering, Tsinghua University, 100084 Beijing, China.
Single-cell multi-omics techniques, which enable the simultaneous measurement of multiple modalities such as RNA gene expression and Assay for Transposase-Accessible Chromatin (ATAC) within individual cells, have become a powerful tool for deciphering the intricate complexity of cellular systems. Most current methods rely on motif databases to establish cross-modality relationships between genes from RNA-seq data and peaks from ATAC-seq data. However, these approaches are constrained by incomplete database coverage, particularly for novel or poorly characterized relationships.
View Article and Find Full Text PDFBMC Prim Care
January 2025
Département de psychiatrie, Centre de recherche de l'Institut universitaire en santé mentale de Montréal, Université de Montréal, Montreal, QC, Canada.
Objectives: This study identified profiles of outpatient physician follow-up care and other practice features, mostly after detection of incident mental disorders (MD), and associated these profiles with patient characteristics and subsequent adverse outcomes.
Methods: A cohort of 170,957 patients age 12 + with a new or recurrent MD detected in 2019-20 was investigated based on data from the Quebec Integrated Chronic Disease Surveillance System. Latent class analysis was performed to identify follow-up care profiles, mostly within one year of MD detection.
Prev Vet Med
January 2025
School of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington LE12 5RD, UK.
Whilst livestock management technologies may help to improve productivity, economic performance, and animal welfare on farms, there has been low uptake of technologies across farming systems and countries. This study aimed to understand dairy farmers' intention to use calf management technologies by combining partial least squares structural equation modelling (PLS-SEM) with qualitative comparative analysis (QCA). We evaluated the hypotheses that dairy farmers will intend to use calf technologies if they have sufficient competencies, sufficient materials, and positive meanings (e.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!