Learn Less, Infer More: Learning in the Fourier Domain for Quantitative Susceptibility Mapping.

Front Neurosci

CREATIS, IRP Metislab, University of Lyon, INSA Lyon, CNRS UMR 5220, Inserm U1294, Lyon, France.

Published: February 2022

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Article Abstract

Quantitative susceptibility mapping (QSM) aims to evaluate the distribution of magnetic susceptibility from magnetic resonance phase measurements by solving the ill-conditioned dipole inversion problem. Removing the artifacts and preserving the anisotropy of tissue susceptibility simultaneously is still a challenge in QSM. To deal with this issue, a novel k-QSM network is proposed to resolve dipole inversion issues in QSM reconstruction. The k-QSM network converts the results obtained by truncated k-space division (TKD) into the Fourier domain as inputs. After passing through several convolutional and residual blocks, the ill-posed signals of TKD are corrected by making the network output close to the calculation of susceptibility through multiple orientation sampling (COSMOS)-labeled QSM. To evaluate the superiority of k-QSM, comparisons with several state-of-the-art methods are performed in terms of QSM artifacts removing, anisotropy preserving, generalization ability, and clinical applications. Compared to existing methods, the k-QSM achieves a 22.31% lower normalized root mean square error, 10.30% higher peak signal-to-noise ratio (PSNR), 33.10% lower high-frequency error norm, and 1.06% higher structural similarity. In addition, the orientation-dependent susceptibility variation obtained by k-QSM is significant, verifying that k-QSM has the ability to preserve susceptibility anisotropy. When the trained models are tested on the dataset from different centers, our k-QSM shows a strong generalization ability with the highest PSNR. Moreover, by comparing the susceptibility maps between healthy controls and drug addicts with different methods, we found the proposed k-QSM is more sensitive to the susceptibility abnormality in the patients. The proposed k-QSM method learns less-only to fix the ill-posed signals of TKD, but infers more-both COSMOS-like and anisotropy-preserving QSM results. Its generalization ability and great sensitivity to susceptibility changes can make it a potential method for distinguishing some diseases.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8888664PMC
http://dx.doi.org/10.3389/fnins.2022.837721DOI Listing

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