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Genome-Based Classification of Strain 16-SW-7, a Marine Bacterium Capable of Converting B Red Blood Cells, as and Proposal to Reclassify as a Later Heterotypic Synonym of . | LitMetric

AI Article Synopsis

  • * Phylogenetic analysis indicates that strain 16-SW-7 is closely related to KMM 638 and KMM 3548, sharing up to 100% genetic similarity, and has specific growth requirements and metabolic capabilities involving casein, gelatin, and various fatty acids.
  • * The strain's complete genome is 4,531,445 bp with two circular chromosomes, and it is proposed to be a novel species based on genetic, chem

Article Abstract

A strictly aerobic, Gram-stain-negative, rod-shaped, and motile bacterium, designated strain 16-SW-7, isolated from a seawater sample, was investigated in detail due to its ability to produce a unique α-galactosidase converting B red blood cells into the universal type blood cells. The phylogenetic analysis based on 16S rRNA gene sequences revealed that the strain 16-SW-7 is a member of the genus . The closest relatives of the environmental isolate were KMM 638 and KMM 3548, with the plural paralogous 16S rRNA genes of 99.87-100% similarity. The strain 16-SW-7 grew with 1-10% NaCl and at 4-34°C, and hydrolyzed casein, gelatin, tyrosine, and DNA. The genomic DNA G+C content was 39.3 mol%. The prevalent fatty acids were C ω7, C, C ω8, C ω7, C, and C 3-OH. The polar lipid profile was characterized by the presence of phosphatidylethanolamine, phosphatidylglycerol, two unidentified amino lipids, and three unidentified lipids. The major respiratory quinone was Q-8. The finished genome of the strain 16-SW-7 (GenBank assembly accession number: GCA_005877035.1) has a size of 4,531,445 bp and comprises two circular chromosomes L1 and S1, deposited in the GenBank under the accession numbers CP040558 and CP040559, respectively. The strain 16-SW-7 has the ANI values of 98.2% with KMM 638 and KMM 3548 and the DDH values of 84.4 and 83.5%, respectively, indicating clearly that the three strains belonged to a single species. According to phylogenetic evidence and similarity for the chemotaxonomic and genotypic properties, the strain 16-SW-7 (= KCTC 52772 = KMM 701) represents a novel member of the species . Also, we have proposed to reclassify as a later heterotypic synonym of based on the rules of priority with the emendation of the species.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8865838PMC
http://dx.doi.org/10.3389/fmicb.2021.809431DOI Listing

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