Self-assembly is a ubiquitous process in synthetic and biological systems, broadly defined as the spontaneous organization of multiple subunits (e.g. macromolecules, particles) into ordered multi-unit structures. The vast majority of equilibrium assembly processes give rise to two states: one consisting of dispersed disassociated subunits, and the other, a bulk-condensed state of unlimited size. This review focuses on the more specialized class of , which describes equilibrium assembly processes resulting in finite-size structures. These systems pose a generic and basic question, how do thermodynamic processes involving non-covalent interactions between identical subunits "measure" and select the size of assembled structures? In this review, we begin with an introduction to the basic statistical mechanical framework for assembly thermodynamics, and use this to highlight the key physical ingredients that ensure equilibrium assembly will terminate at finite dimensions. Then, we introduce examples of self-limiting assembly systems, and classify them within this framework based on two broad categories: and . These include well-known cases in biology and synthetic soft matter - micellization of amphiphiles and shell/tubule formation of tapered subunits - as well as less widely known classes of assemblies, such as short-range attractive/long-range repulsive systems and geometrically-frustrated assemblies. For each of these self-limiting mechanisms, we describe the physical mechanisms that select equilibrium assembly size, as well as potential limitations of finite-size selection. Finally, we discuss alternative mechanisms for finite-size assemblies, and draw contrasts with the size-control that these can achieve relative to self-limitation in equilibrium, single-species assemblies.
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http://dx.doi.org/10.1103/revmodphys.93.025008 | DOI Listing |
J Chem Phys
March 2025
Department of Advanced Optical and Microelectronic Equipment, Shanghai Institute of Optics and Fine Mechanics, Chinese Academy of Sciences, Shanghai 201800, China.
Self-consistent field theory (SCFT) is a powerful polymer field-theoretic simulation tool that plays a crucial role in the study of block copolymer (BCP) self-assembly. However, the computational cost of implementing SCFT simulations is comparatively high, particularly in computationally demanding applications where repeated forward simulations are needed. Herein, we propose a deep learning-based method to accelerate the SCFT simulations.
View Article and Find Full Text PDFMicromachines (Basel)
February 2025
School of Physics and Electronic Science, Changsha University of Science and Technology, Changsha 410114, China.
Quartz flexible accelerometers (QFAs) are a type of temperature-sensitive sensor, whereby a change in temperature will cause the key parameters of the accelerometer to drift and cause stability errors. Due to the absence of effective methods for sensing the temperature of internal accelerometer components, existing temperature error correction approaches primarily rely on shell temperature measurements to establish correction models. Consequently, most correction methods achieve higher accuracy during the steady-state heat conduction phase of the accelerometer, whereas the correction error markedly increases during the transient heat conduction phase.
View Article and Find Full Text PDFACS Nano
March 2025
School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu, Shandong 273165, P. R. China.
Self-assembly of coinage metal nanoclusters constitutes an important branch for the construction of bright luminescent materials. They also serve as a class of promising building blocks for the study of hierarchically organized assemblies due to their potential of generating high structural complexity. However, the strong intercluster interactions exert great difficulty and uncertainty on the modulation of the outcome aggregation structures.
View Article and Find Full Text PDFJ Chem Theory Comput
March 2025
Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina 27606, United States of America.
Colloidal particles with anisotropic geometries and interactions display rich phase behavior and hence have the potential to serve as the basis of functional materials, which can tunably and reversibly self-assemble into different configurations. External fields are one design parameter that can be used to manipulate how systems of colloidal particles assemble with one another. One challenge in designing new materials using anisotropic colloidal particles is understanding how an individual particle's various anisotropic features, like geometry, affect their overall self-assembly.
View Article and Find Full Text PDFBio Protoc
February 2025
Department of Biochemistry and Molecular Biophysics, Columbia University Irving Medical Center, New York, NY, USA.
Time-resolved cryo-EM (TRCEM) makes it possible to provide structural and kinetic information on a reaction of biomolecules before the equilibrium is reached. Several TRCEM methods have been developed in the past to obtain key insights into the mechanism of action of molecules and molecular machines on the time scale of tens to hundreds of milliseconds, which is unattainable by the normal blotting method. Here, we present our TRCEM setup utilizing a polydimethylsiloxane (PDMS)-based microfluidics chip assembly, comprising three components: a PDMS-based, internally SiO-coated micromixer, a glass-capillary microreactor, and a PDMS-based microsprayer for depositing the reaction product onto the EM grid.
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