Diatom communities significantly influence ocean primary productivity and carbon cycling, but their spatial and temporal dynamics are highly heterogeneous and are governed by a complex diverse suite of abiotic and biotic factors. We examined the seasonal and biogeographical dynamics of diatom communities in Australian coastal waters using amplicon sequencing data (18S-16S rRNA gene) derived from a network of oceanographic time-series spanning the Australian continent. We demonstrate that diatom community composition in this region displays significant biogeography, with each site harbouring distinct community structures. Temperature and nutrients were identified as the key environmental contributors to differences in diatom communities at all sites, collectively explaining 21% of the variability observed in diatoms assemblages. However, specific groups of bacteria previously implicated in mutualistic ecological interactions with diatoms (Rhodobacteraceae, Flavobacteriaceae and Alteromonadaceae) also explained a further 4% of the spatial dynamics observed in diatom community structure. We also demonstrate that the two most temperate sites (Port Hacking and Maria Island) exhibited strong seasonality in diatom community and that at these sites, winter diatom communities co-occurred with higher proportion of Alteromonadaceae. In addition, we identified significant co-occurrence between specific diatom and bacterial amplicon sequence variants (ASVs), with members of the and clades strongly correlated with some of the most abundant diatom genera (, , and ). We propose that some of these co-occurrences might be indicative of ecologically important interactions between diatoms and bacteria. Our analyses reveal that in addition to physico-chemical conditions (i.e., temperature, nutrients), the relative abundance of specific groups of bacteria appear to play an important role in shaping the spatial and temporal dynamics of marine diatom communities.
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http://dx.doi.org/10.3390/microorganisms10020338 | DOI Listing |
Sci Total Environ
January 2025
Geosciences and Environment Toulouse, Université de Toulouse, CNRS, Université Toulouse 3 Paul Sabatier (UPS), 14 Avenue Edouard Belin, 31400 Toulouse, France; BIO-GEO-CLIM Laboratory, Tomsk State University, 36 Lenin Ave, 634050, Tomsk, Russia. Electronic address:
Copper (Cu) and zinc (Zn) are two trace metals that exhibit both limiting and toxic effects on aquatic microorganisms. However, in contrast to good knowledge of these metal interactions with individual microbial cultures, the biofilm, complex natural consortium of microorganisms, remains poorly understood with respect to its control on Cu and Zn in the aquatic environments. Towards constraining the magnitude and mechanisms of Cu and Zn isotope fractionation in the presence of phototrophic biofilms composed of different proportion of diatoms, green algae and cyanobacteria, we studied long-term growth in a rotating annular bioreactor and quantified the uptake of metals and their isotope fractionation at environmentally-relevant Cu and Zn concentrations.
View Article and Find Full Text PDFJ Environ Manage
January 2025
Department of Life Sciences, Kathmandu University, Dhulikhel, Nepal.
The extent of alien taxa impacts on river ecosystem health is unclear, but their frequency continues to rise. We investigated 1) the prevalence of including alien taxa in common bioindicators used in river bioassessment, 2) the effect of alien taxa on the richness and abundance of natives, and 3) whether including alien taxa in bioassessment tools increased their sensitivity to river degradation. In the 17 countries analyzed fish represented the greatest number of alien species (1726), followed by macrophytes (925), macroinvertebrates (556), and diatoms (7).
View Article and Find Full Text PDFPolar Biol
January 2025
Fisheries and Marine Institute, Memorial University of Newfoundland and Labrador, St. John's, NL Canada.
Unlabelled: iKaluk, Inuttitut for Arctic charr (), holds significant commercial and cultural value for Inuit communities throughout Nunatsiavut. Studies evaluating iKaluk habitat associations in freshwater are plentiful; however, there is limited information on the ecological makeup and sediment characteristics of anadromous charr habitats in marine environments. This study investigated the benthic associations of Arctic charr during their marine residency period in Nain, Nunatsiavut, using underwater videos, harvester-identified fishing locations, and acoustic telemetry.
View Article and Find Full Text PDFMar Environ Res
January 2025
Library of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53201, Republic of Korea; Department of Ocean Science, University of Science & Technology, Daejeon, 34113, Republic of Korea. Electronic address:
Nucleocytoplasmic large DNA viruses (NCLDVs) are known to infect phytoplankton and play a significant role in regulating their population dynamics. In this study, we aimed to investigate the co-occurrence patterns between phytoplankton and NCLDVs in the southern coastal ecosystem of South Korea. We collected seawater every month from March 2018 to December 2020 and analyzed the samples using Cytochrome c Oxidase subunit I metabarcoding and metagenomic analyses.
View Article and Find Full Text PDFSci Rep
December 2024
Center for Photonic Science and Engineering, Skolkovo Institute of Science and Technology, 30 Bolshoy Boulevard, bld. 1, Moscow, 121205, Russia.
Photonic-based methods are crucial in biology and medicine due to their non-invasive nature, allowing remote measurements without affecting biological specimens. The study of diatoms using advanced photonic methods remains a relatively underexplored area, presenting significant opportunities for pioneering discoveries. This research provides a comprehensive analysis of marine diatoms, specifically Nitzschia sp.
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