Benchmarking DFT functionals is complicated since the results highly depend on which properties and materials were used in the process. Unwanted biases can be introduced if a data set contains too many examples of very similar materials. We show that a clustering based on the distribution of density gradient and kinetic energy density is able to identify groups of chemically distinct solids. We then propose a method to create smaller data sets or rebalance existing data sets in a way that no region of the meta-GGA descriptor space is overrepresented, yet the new data set reproduces average errors of the original set as closely as possible. We apply the method to an existing set of 44 inorganic solids and suggest a representative set of seven solids. The representative sets generated with this method can be used to make more general benchmarks or to train new functionals.
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http://dx.doi.org/10.1021/acs.jctc.1c00536 | DOI Listing |
Pain Rep
February 2025
Pain Research Institute, Institute of Life Course and Medical Sciences, University of Liverpool, Liverpool, United Kingdom.
Introduction: Pain phenomenology in patients with fibromyalgia syndrome (FMS) shows considerable overlap with neuropathic pain. Altered neural processing leading to symptoms of neuropathic pain can occur at the level of the spinal cord, and 1 potential mechanism is spinal disinhibition. A biomarker of spinal disinhibition is impaired H-reflex rate-dependent depression (HRDD).
View Article and Find Full Text PDFSci Rep
December 2024
School of Computer and Information Engineering, Shanghai Polytechnic University, Shanghai, 201209, China.
To mitigate the safety risks and economic losses caused by wheel damage, this paper proposes an interval valued fuzzy inference-based sound analysis method for wheel damage detection. Firstly, interval valued fuzzy sets are defined to represent various levels of damage severity. A similarity calculation method is then designed, based on the defined interval valued fuzzy sets, to assess the damage level of wheel components.
View Article and Find Full Text PDFBMC Infect Dis
December 2024
KEMRI-Wellcome Trust Research Programme, P.O. Box 230, Kilifi, Kenya.
Increased immune evasion by emerging and highly mutated SARS-CoV-2 variants is a key challenge to the control of COVID-19. The majority of these mutations mainly target the spike protein, allowing the new variants to escape the immunity previously raised by vaccination and/or infection by earlier variants of SARS-CoV-2. In this study, we investigated the neutralizing capacity of antibodies against emerging variants of interest circulating between May 2023 and October 2024 using sera from representative samples of the Kenyan population.
View Article and Find Full Text PDFAm J Pathol
December 2024
Department of Computer Science, Faculty of Engineering Sciences, University College London, Gower Street, London, WC1E 6BT, United Kingdom.
Understanding the tumor hypoxic microenvironment is crucial for grasping tumor biology, clinical progression, and treatment responses. This study presents a novel application of AI in computational histopathology to evaluate hypoxia in breast cancer. Weakly Supervised Deep Learning (WSDL) models can accurately detect morphological changes associated with hypoxia in routine Hematoxylin and Eosin (H&E) whole slide images (WSI).
View Article and Find Full Text PDFBMC Med Res Methodol
December 2024
Janssen Research & Development LLC, Global Epidemiology Organization, Raritan, NJ, USA.
Background: Autoimmune disorders have primary manifestations such as joint pain and bowel inflammation but can also have secondary manifestations such as non-infectious uveitis (NIU). A regulatory health authority raised concerns after receiving spontaneous reports for NIU following exposure to Remicade, a biologic therapy with multiple indications for which alternative therapies are available. In assessment of this clinical question, we applied validity diagnostics to support observational data causal inferences.
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