Microbial communities associated with deep-sea animals are critical to the establishment of novel biological communities in unusual environments. Over the past few decades, rapid exploration of the deep sea has enabled the discovery of novel microbial communities, some of which form symbiotic relationships with animal hosts. Symbiosis in the deep sea changes host physiology, behavior, ecology, and evolution over time and space. Symbiont diversity within a host is often aligned with diverse metabolic pathways that broaden the environmental niche for the animal host. In this review, we focus on microbiomes and obligate symbionts found in different deep-sea habitats and how they facilitate survival of the organisms that live in these environments. In addition, we discuss factors that govern microbiome diversity, host specificity, and biogeography in the deep sea. Finally, we highlight the current limitations of microbiome research and draw a road map for future directions to advance our knowledge of microbiomes in the deep sea.
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http://dx.doi.org/10.1146/annurev-animal-081621-112021 | DOI Listing |
Ecol Evol
January 2025
Instituto Milenio de Oceanografía (IMO) Universidad de Concepción Concepción Chile.
Mechanisms driving the spatial and temporal patterns of species distribution in the Earth's largest habitat, the deep ocean, remain largely enigmatic. The late Miocene to the Pliocene (~23-2.58 Ma) is a period that was marked by significant geological, climatic, and oceanographic changes.
View Article and Find Full Text PDFInt J Remote Sens
November 2024
Department of Physical Geography, Utrecht University, Utrecht, The Netherlands.
Tidal flat ecosystems, are under steady decline due to anthropogenic pressures including sea level rise and climate change. Monitoring and managing these coastal systems requires accurate and up-to-date mapping. Sediment characteristics and macrozoobenthos are major indicators of the environmental status of tidal flats.
View Article and Find Full Text PDFFood Res Int
February 2025
Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Key Laboratory of Seafood Processing of Haikou, College of Food Science and Technology, Hainan University, Hainan 570228, China; Collaborative Innovation Center of Provincial and Ministerial Co-Construction for Marine Food Deep Processing, Dalian Polytechnic University, Dalian 116034, China. Electronic address:
This study explored the effect of lactoferrin (LF)-stabilized fish oil Pickering high internal phase emulsions (HIPPEs) on the gel property and 3D printing performance of skipjack tuna surimi compared with directly added fish oil. Based on the various environmental stress stability, HIPPEs could remain relatively stable when added to surimi gels. The luminance and whiteness of skipjack tuna surimi gel were significantly (p < 0.
View Article and Find Full Text PDFSci Rep
January 2025
Biology School, University of Costa Rica, San Pedro, San José, 11501-20260, Costa Rica.
Plasmids play a crucial role in facilitating genetic exchange and enhancing the adaptability of microbial communities. Despite their importance, environmental plasmids remain understudied, particularly those in fragile and underexplored ecosystems such as the deep-sea. In this paper we implemented a bioinformatics pipeline to study the composition, diversity, and functional attributes of plasmid communities (plasmidome) in 81 deep-sea metagenomes from the Tara and Malaspina expeditions, sampled from the Pacific, Atlantic, and Indian Oceans at depths ranging from 270 to 4005 m.
View Article and Find Full Text PDFZookeys
January 2025
Department of Applied Zoology, Faculty of Biology, VNU University of Science, Vietnam National University, Ha Noi, 334 Nguyen Trai, Thanh Xuan, Hanoi, Vietnam Vietnam National University Hanoi Vietnam.
A new supergiant species of A. Milne-Edwards, 1879 from Vietnam is described. is characterised by its wide, rectangular clypeal region with parallel lateral margins, concave distal margin, and narrowly acute apex; the distally narrowing and posteriorly curved coxa of pereopod 7; and the presence of 11 upwardly curved pleotelson spines.
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