Cyclic dipeptides, also know as diketopiperazines (DKP), the simplest cyclic forms of peptides widespread in nature, are unsurpassed in their structural and bio-functional diversity. DKPs, especially those containing proline, due to their unique features such as, inter alia, extra-rigid conformation, high resistance to enzyme degradation, increased cell permeability, and expandable ability to bind a diverse of targets with better affinity, have emerged in the last years as biologically pre-validated platforms for the drug discovery. Recent advances have revealed their enormous potential in the development of next-generation theranostics, smart delivery systems, and biomaterials. Here, we present an updated review on the biological and structural profile of these appealing biomolecules, with a particular emphasis on those with anticancer properties, since cancers are the main cause of death all over the world. Additionally, we provide a consideration on supramolecular structuring and synthons, based on the proline-based DKP privileged scaffold, for inspiration in the design of compound libraries in search of ideal ligands, innovative self-assembled nanomaterials, and bio-functional architectures.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8533947PMC
http://dx.doi.org/10.3390/biom11101515DOI Listing

Publication Analysis

Top Keywords

cyclic dipeptides
8
biological structural
8
dipeptides biological
4
structural landscape
4
landscape special
4
special focus
4
focus anti-cancer
4
anti-cancer proline-based
4
proline-based scaffold
4
scaffold cyclic
4

Similar Publications

Article Synopsis
  • The study highlights the potential of marine natural products as a resource for pharmaceuticals, focusing on a bacterium (S-1) found in shallow sea sediments.
  • Researchers isolated a novel compound (4-(dimethylamino)-1-(2-((4-hydroxybenzoyl)oxy)propyl)pyridin-1-ium) and 15 known cyclic dipeptides from S-1, using NMR and optical rotation for structural analysis.
  • The novel compound demonstrated antibacterial activity with a minimum inhibitory concentration (MIC) of 50 µg/mL, marking it as the first discovered pyridinium derivative and cyclic dipeptides from this marine source.
View Article and Find Full Text PDF

Three New Dipeptide and Two New Polyketide Derivatives from the Mangrove-Derived Fungus sp.: Antioxidant Activity of Two Isolated Substances.

Mar Drugs

December 2024

CAS Key Laboratory of Tropical Marine Bio-resources and Ecology/Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China.

Five new metabolites, including three cyclic dipeptide derivatives (-) and two new polyketides (-), together with nine known ones (- and -), were isolated from the mangrove-sediments-derived fungus sp. SCSIO 41431. Their structures were determined using detailed NMR, MS spectroscopic analyses, and quantum chemical calculations.

View Article and Find Full Text PDF

In this work, we fabricated the Fmoc-Pro-Phe-OMe modified carbon paste electrode (FPPO/MCPE) and used it for electrochemical detection of CP and FZ in a 0.1 M phosphate buffer solution (pH = 7). We characterized the Fmoc-Pro-Phe-OMe and applied it for the electrochemical detection of CP and FZ.

View Article and Find Full Text PDF

A new class of cyclic dipeptide-isatin hybrids was synthesized using 2,5-diketopiperazine and various isatin derivatives bearing flexible chains and extended aromatic rings in a double Knoevenagel condensation process. These new series demonstrate high solubility and good thermal stability with decomposition temperatures exceeding 370 °C, especially the molecular design with efficient space-filling (CI5 and CI6) stabilized columnar liquid crystalline phase. The hole and electron carrier mobility of the CI5 compound, measured using the space charge limited current (SCLC) technique, were found to be 9.

View Article and Find Full Text PDF

Small cyclic dipeptide produced by with anti-biofilm properties against biofilm.

Biofilm

December 2024

Department of Life Sciences, School of Natural Sciences, Shiv Nadar Institution of Eminence, Delhi NCR, Greater Noida, 201314, India.

Article Synopsis
  • - The oral cavity is home to a diverse range of bacteria known as the oral microbiome, which plays a crucial role in maintaining oral health, but imbalances can lead to diseases like dental caries, gingivitis, and periodontitis.
  • - The study investigated a specific metabolite extracted from a bacterial strain, which showed the ability to inhibit biofilm formation in a dose-dependent manner, effectively reducing biofilm thickness as observed through confocal microscopy.
  • - Further analysis identified the compound as a small cyclic peptide, cyclo (-L-Leu-L-Pro), and it was found to disrupt biofilms by altering the expression of key genes involved in biofilm formation.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!