Characterization of gene family and functional analysis of involved in heat tolerance in radish ( L.).

Physiol Mol Biol Plants

National Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Horticultural Crop Biology and Genetic Improvement (East China) of MOAR, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095 China.

Published: September 2021

AI Article Synopsis

  • Plant annexins are special proteins that help plants grow and handle stress.
  • Researchers studied radish plants to find a group of 10 genes related to these annexins and discovered they work across different chromosomes.
  • The study showed that these genes are important for helping radishes survive tough conditions like heat and drought, and changing their activity affects plant growth and survival.

Article Abstract

Unlabelled: Plant annexins are a kind of conserved Ca-dependent phospholipid-binding proteins which are involved in plant growth, development and stress tolerance. Radish is an economically important annual or biennial root vegetable crop worldwide. However, the genome-wide characterization of () gene family remain largely unexplored in radish. In this study, a comprehensive identification of a gene family was performed at the whole genome level in radish. In total, ten genes were identified, and these putative RsANN proteins shared typical characteristics of the annexin family proteins. Phylogenetic analysis showed that the RsANNs together with annexin from Arabidopsis and rice were clustered into five groups with shared similar motif patterns. Chromosomal localization showed that these ten genes were distributed on six chromosomes (R3-R8) of radish. Several -elements involved in abiotic stress response were identified in the promoter regions of genes. Expression profile analysis indicated that the genes exhibited tissue-specific patterns at different growth stages and tissues. The Real-time quantitative PCR (RT-qPCR) revealed that the expression of most genes was induced under various abiotic stresses including heat, drought, salinity, oxidization and ABA stress. In addition, stress assays showed that overexpression of improved plant's growth and heat tolerance, while artificial microRNAs (amiRNA)-mediated knockdown of caused dramatically decreased survival ratio of Arabidopsis plants. These findings not only demonstrate that might play a critical role in the heat stress response of radish, but also facilitate clarifying the molecular mechanism of genes in regulating the biological process governing plant growth and development.

Supplementary Information: The online version contains supplementary material available at 10.1007/s12298-021-01056-5.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8484430PMC
http://dx.doi.org/10.1007/s12298-021-01056-5DOI Listing

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