Absorption and fluorescence spectroscopy techniques provide a wealth of information on molecular systems. The simulations of such experiments remain challenging, however, despite the efforts put into developing the underlying theory. An attractive method of simulating the behavior of molecular systems is provided by the quantum-classical theory─it enables one to keep track of the state of the bath explicitly, which is needed for accurate calculations of fluorescence spectra. Unfortunately, until now there have been relatively few works that apply quantum-classical methods for modeling spectroscopic data. In this work, we seek to provide a framework for the calculations of absorption and fluorescence lineshapes of molecular systems using the methods based on the quantum-classical Liouville equation, namely, the forward-backward trajectory solution (FBTS) and the non-Hamiltonian variant of the Poisson bracket mapping equation (PBME-nH). We perform calculations on a molecular dimer and the photosynthetic Fenna-Matthews-Olson complex. We find that in the case of absorption, the FBTS outperforms PBME-nH, consistently yielding highly accurate results. We next demonstrate that for fluorescence calculations, the method of choice is a hybrid approach, which we call PBME-nH-Jeff, that utilizes the effective coupling theory [Gelzinis, A.; 2020, 152, 051103] to estimate the excited state equilibrium density operator. Thus, we find that FBTS and PBME-nH-Jeff are excellent candidates for simulating, respectively, absorption and fluorescence spectra of real molecular systems.
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http://dx.doi.org/10.1021/acs.jctc.1c00777 | DOI Listing |
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January 2025
School of Environmental Science and Engineering, Hebei University of Science and Technology, Shijiazhuang 050018, China.
Trivalent chromium (Cr) is a heavy metal widely present in tannery wastewater, and organic ligands represented by gallic acid (GA) have significant effects on the environmental behavior of Cr. This study explored the binding process of Cr with GA through the integration of ultraviolet-visible (UV-vis), Fourier transform infrared (FTIR), and fluorescence spectroscopy coupled with two-dimensional correlation analyses (2DCOS). UV-vis results showed that the average molecular weight of the solutions gradually increased with the addition of Cr ions.
View Article and Find Full Text PDFHeliyon
January 2025
College of Chemical Engineering, Zhejiang University of Technology, China.
Titania (TiO) is one of promising photo catalysts for its high ability to resistant photo corrosion and environmental friendliness, but its photocatalytic activity is too low to be used in industry. To find an approach to solve this problem, graphene oxide (GO), tungsten trioxide (WO) and TiO composite with hollow mesoporous structure was prepared by a two-step spray drying method. The composite was used as raw material to constitute a membrane onto ITO glass to form a membrane photo-anode.
View Article and Find Full Text PDFPhotochem Photobiol
January 2025
Departamento de Bioquímica, Facultad de Ciencias Naturales, Exactas y Tecnología, Universidad de Panamá, Panamá, Republic of Panama.
Toluidine blue O (TBO) is a type I-type II photosensitizer that has shown good efficacy and selectivity in antimicrobial and anticancer photodynamic therapy applications. However, its complex photochemistry with multiple photoproducts hinders its application as a photosensitizer. We have previously described the mechanism for photooxidative demethylation of TBO which in acetonitrile yields two main products: demethylated-TBO (d-TBO) and double-demethylated-TBO (dd-TBO).
View Article and Find Full Text PDFInt J Biol Macromol
January 2025
Key Laboratory of Jianghuai Agricultural Product Fine Processing and Resource Utilization, Ministry of Agriculture and Rural Affairs, Anhui Engineering Research Center for High Value Utilization of Characteristic Agricultural Products, College of Food and Nutrition, Anhui Agricultural University, Hefei, Anhui 230036, China. Electronic address:
This study aimed to elucidate the pathways through which covalent and non-covalent interactions between deamidated gliadin (DG) and tannic acid (TA) on influence the stability of Pickering emulsions. The interactions induced protein unfolding, as evidenced by increased ultraviolet absorption and a red shift in fluorescence emission. DG-TA composite nanoparticles effectively stabilized high internal phase emulsions, whereas DG nanoparticles alone did not.
View Article and Find Full Text PDFInt J Biol Macromol
January 2025
School of Chemistry, Liaoning University, Shenyang 110036, China. Electronic address:
In this study, the interactions between three quaternary ammonium salt (QAS) cationic surfactants with different branched-chain lengths (TMBAC, TEBAC, and TBBAC) and DNA are investigated by UV-vis absorption, fluorescence and CD spectroscopy, viscosity method, and gel electrophoresis. Berberine hydrochloride (BR) is utilized as a fluorescent probe. The three interaction modes and strengths are compared.
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