5-HT Receptor Subfamily and the Halogen Bond Promise.

J Chem Inf Model

Unidad de Gráfica Molecular, Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Sergio Livingstone 1007, Independencia, Santiago 8380494, Chile.

Published: October 2021

The binding of C-4-halogenated 1-(4-X-2,5-dimethoxyphenyl)-2-aminopropane (DOX) serotonin agonist psychedelics at all three 5-HT receptor subtypes is up to two orders of magnitude stronger for X = Cl, Br, or I (but not F) than when C-4 bears a hydrogen atom and more than expected from their hydrophobicities. Our docking and molecular dynamics simulations agree with the fact that increasing the polarizability of halogens results in halogen-oxygen distances to specific backbone C═O groups, and C-X···O angles, in ranges expected for halogen bonds (XBs), which could contribute to the high affinities observed. Good linear correlations are found for each receptor type, indicating that the binding pocket-ligand affinity is enhanced as the XB interaction becomes stronger (i.e., I ≈ Br > Cl > F). It is also striking to note how the linear equations unveil that the receptor's response on the strength of the XB interaction is quite similar among 5-HT and 5-HT, whereas the 5-HT's sensitivity is less. The calculated dipole polarizabilities in the binding pocket of the receptors reflect the experimental affinity values, indicating that less-polarizable and harder binding sites are more prone to XB formation.

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.jcim.1c00466DOI Listing

Publication Analysis

Top Keywords

5-ht receptor
8
5-ht
4
receptor subfamily
4
subfamily halogen
4
halogen bond
4
bond promise
4
binding
4
promise binding
4
binding c-4-halogenated
4
c-4-halogenated 1-4-x-25-dimethoxyphenyl-2-aminopropane
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!