Artificial microbial consortia seek to leverage division-of-labour to optimize function and possess immense potential for bioproduction. Co-culturing approaches, the preferred mode of generating a consortium, remain limited in their ability to give rise to stable consortia having finely tuned compositions. Here, we present an artificial differentiation system in budding yeast capable of generating stable microbial consortia with custom functionalities from a single strain at user-defined composition in space and in time based on optogenetically-driven genetic rewiring. Owing to fast, reproducible, and light-tunable dynamics, our system enables dynamic control of consortia composition in continuous cultures for extended periods. We further demonstrate that our system can be extended in a straightforward manner to give rise to consortia with multiple subpopulations. Our artificial differentiation strategy establishes a novel paradigm for the creation of complex microbial consortia that are simple to implement, precisely controllable, and versatile to use.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8492667PMC
http://dx.doi.org/10.1038/s41467-021-26129-7DOI Listing

Publication Analysis

Top Keywords

microbial consortia
12
differentiation system
8
control consortia
8
artificial differentiation
8
consortia
7
light tunable
4
tunable differentiation
4
system
4
system creation
4
creation control
4

Similar Publications

Microbial fermentation of agro-industrial residues is gaining significant traction as a sustainable and economically viable approach in bioprocessing. This study explored lactic acid production from selected agro-industrial residues: pre-treated sugarcane waste, potato peel waste, or milk processing waste with alfalfa pellets using strains of organic origin. Five homo-fermentative strains (VITJ1, VITJ2, VITJ3, VITJ4, and VITJ5) were assessed for compatibility and formed into 15 consortia.

View Article and Find Full Text PDF

Global perspectives on the biodegradation of LDPE in agricultural systems.

Front Microbiol

January 2025

Corporación para la Investigación de la Corrosión (CIC), Piedecuesta, Colombia.

The increasing use of plastics globally has generated serious environmental and human health problems, particularly in the agricultural sector where low-density polyethylene (LDPE) and other plastics are widely used. Due to its low recycling rate and slow degradation process, LDPE is a major source of pollution. This paper addresses the problem of plastic accumulation in agriculture, focusing on LDPE biodegradation strategies.

View Article and Find Full Text PDF

Synthetic microbial consortia are collections of multiple strains or species of engineered organisms living in a shared ecosystem. Because they can separate metabolic tasks among different strains, synthetic microbial consortia have myriad applications in developing biomaterials, biomanufacturing, and biotherapeutics. However, synthetic consortia often require burdensome control mechanisms to ensure that the members of the community remain at the correct proportions.

View Article and Find Full Text PDF

Comparative metagenomics reveals the metabolic flexibility of coastal prokaryotic microbiomes contributing to lignin degradation.

Biotechnol Biofuels Bioprod

January 2025

Institute of Marine Science and Technology, Shandong University, Qingdao, 266237, Shandong, China.

Coastal wetlands are rich in terrestrial organic carbon. Recent studies suggest that microbial consortia play a role in lignin degradation in coastal wetlands, where lignin turnover rates are likely underestimated. However, the metabolic potentials of these consortia remain elusive.

View Article and Find Full Text PDF

Advances in polyhydroxyalkanoate (PHA) production from renewable waste materials using halophilic microorganisms: A comprehensive review.

Sci Total Environ

January 2025

Biotechnology Program, Center for Sustainable Development, College of Arts and Sciences, Qatar University, Doha 2713, Qatar. Electronic address:

Polyhydroxyalkanoates (PHAs) are biodegradable and biocompatible polymers that can replace conventional plastics in different sectors. However, PHA commercialization is hampered due to their high production cost resulting from the use of high purity substrates, their low conversion into PHAs by using conventional microbial chassis and the high downstream processing cost. Taking these challenges into account, researchers are focusing on the use of waste by-products as alternative low-cost feedstocks for fast-growing and contamination-resistant halophilic microorganisms (Bacteria, Archaea…).

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!