Characterization of the chloroplast genome sequence of (L.C.Chia, H.L.Fung & Y.L.Yang) N.H.Xia (Poaceae).

Mitochondrial DNA B Resour

Institution of Genomics and Bioinformatics, South China Agricultural University, Guangzhou, China.

Published: August 2021

AI Article Synopsis

  • The study focused on the complete chloroplast genome sequencing and characterization of N.H.Xia, a member of the Bambusoideae subfamily in Poaceae.
  • The chloroplast genome was found to be 139,935 bp long, comprising large and small single copy regions, along with reverse repeats, and included 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes.
  • Phylogenetic analysis indicated that N.H.Xia is closely related to other species within the Bambusoideae lineage, identified through comparisons with 36 other complete chloroplast genomes of grasses.

Article Abstract

(L.C.Chia, H.L.Fung & Y.L.Yang) N.H.Xia is a member of the Bambusoideae subfamily in Poaceae. In this study, we sequenced, assembled and characterized the complete chloroplast genome of The complete chloroplast genome was 139,935 bp in size, including a large single copy region of 83,453 bp, a small single-copy region of 12,860 bp and a pair of reverse repeats of 21,811 bp in size. The annotation of the chloroplast genome indicates that it contained 83 protein-coding genes, 36 tRNA genes and 8 rRNA genes. Our phylogenetic analysis of all protein-coding genes from the 36 complete chroloplast grass genomes using as outgroup showed that is closely related to and to form the Bambusoideae lineage of the grass family.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425685PMC
http://dx.doi.org/10.1080/23802359.2021.1972871DOI Listing

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