Molecular Networking-Guided Isolation of New Etzionin-Type Diketopiperazine Hydroxamates from the Persian Gulf Sponge .

Mar Drugs

GEOMAR Centre for Marine Biotechnology (GEOMAR-Biotech), Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106 Kiel, Germany.

Published: July 2021

The Persian Gulf is a unique and biologically diverse marine environment dominated by invertebrates. In continuation of our research interest in the chemistry and biological activity of marine sponges from the Persian Gulf, we selected the excavating sponge for detailed metabolome analyses, in vitro bioactivity screening, and chemical isolation studies. A UPLC-MS/MS (MS) molecular-networking-based dereplication strategy allowed annotation and structural prediction of various diketopiperazines (DKPs) and etzionin-type diketopiperazine hydroxamates (DKPHs) in the crude sponge extract. The molecular-networking-guided isolation approach applied to the crude extract afforded the DKPH etzionin () and its two new derivatives, clioetzionin A () and clioetzionin B (). Another new modified DKP () was identified by MS/MS analyses but could not be isolated in sufficient quantities to confirm its structure. The chemical characterization of the purified DKPHs - was performed by a combination of 1D and 2D NMR spectroscopy, HRMS, HRMS/MS, and [α] analyses. Compounds and exhibited broad antibacterial, antifungal, and anticancer activities, with IC values ranging from 19.6 to 159.1 µM. This is the first study investigating the chemical constituents of a specimen from the Persian Gulf. It is also the first report of full spectroscopic data of etzionin based on extensive spectroscopic analyses.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8402168PMC
http://dx.doi.org/10.3390/md19080439DOI Listing

Publication Analysis

Top Keywords

persian gulf
16
etzionin-type diketopiperazine
8
diketopiperazine hydroxamates
8
molecular networking-guided
4
networking-guided isolation
4
isolation etzionin-type
4
persian
4
hydroxamates persian
4
gulf
4
gulf sponge
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!