Fish are critical ecologically and socioeconomically for subsistence economies in the Arctic, an ecosystem undergoing unprecedented environmental change. Our understanding of the responses of nearshore Arctic fishes to environmental change is inadequate because of limited research on the physicochemical drivers of abundance occurring at a fine scale. Here, high-frequency in situ measurements of pH, temperature, salinity, and dissolved oxygen were paired with daily fish catches in nearshore Alaskan waters of the Beaufort Sea. Due to the threat that climate change poses to high-latitude marine ecosystems, our main objective was to characterize the abiotic drivers of abundance and elucidate how nearshore fish communities may change in the future. We used generalized additive models (GAMs) to describe responses to the nearshore environment for 18 fish species. Relationships between abundance and the physicochemical environment were variable between species and reflected life history. Each abiotic covariate was significant in at least one GAM, exhibiting both nonlinear and linear associations with abundance. Temperature was the most important predictor of abundance and was significant in GAMs for 11 species. Notably, pH was a significant predictor of abundance for six species: Arctic cod (), broad whitefish (), Dolly Varden (), ninespine stickleback (), saffron cod (), and whitespotted greenling (). Broad whitefish and whitespotted greenling abundance was positively associated with pH, while Arctic cod and saffron cod abundance was negatively associated with pH. These results may be a bellwether for future nearshore Arctic fish community change by providing a foundational characterization of the relationships between abundance and the abiotic environment, particularly in regard to pH, and demonstrate the importance of including a wider range of physicochemical habitat covariates in future research.
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http://dx.doi.org/10.1002/ece3.7940 | DOI Listing |
Chemosphere
December 2024
School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea. Electronic address:
Genes in microorganisms influence the biological processes in anaerobic digestion (AD). However, key genes involved in the four metabolic steps (hydrolysis, acidogenesis, acetogenesis, and methanogenesis) remain largely unexplored. This study investigated the abundance and distribution of key functional genes in full-scale anaerobic digesters processing food waste (FWDs) and municipal wastewater (MWDs) through 16S rRNA gene and shotgun metagenomic analysis.
View Article and Find Full Text PDFCancer Lett
December 2024
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China. Electronic address:
Acute myeloid leukemia (AML) has lagged in benefiting from immunotherapies, primarily due to the scarcity of actionable AML-specific antigens. Driver mutations represent promising immunogenic targets, but a comprehensive characterization of the AML neoantigen landscape and their impact on patient outcomes and the AML immune microenvironment remain unclear. Herein, we conducted matched DNA and RNA sequencing on 304 AML patients and extensively integrated data from additional ∼2,500 AML cases, identifying 49 driver genes, notably characterized by a significant proportion of insertions and deletions (indels).
View Article and Find Full Text PDFMar Environ Res
December 2024
College of Marine Living Resource Sciences and Management, Shanghai Ocean University, Shanghai 201306, China; Center for Polar Research, Shanghai Ocean University, Shanghai 201306, China; Polar Marine Ecosystem Group, The Key Laboratory of Sustainable Exploitation of Oceanic Fisheries Resources, Ministry of Education, Shanghai 201306, China; National Engineering Research Center for Oceanic Fisheries, Shanghai 201306, China. Electronic address:
Antarctic krill (Euphausia superba) is a key part of the food web in the Southern Ocean ecosystem. Significant inter-annual fluctuations in population dynamics make stock assessment and management of its population a significant challenge. To better understand the population dynamics and fluctuation of krill, a survey-based age-structured catch-at-length model (ACL) is used to estimate the periodic fluctuations, based on length data collected from scientific surveys under the US Antarctic Marine Living Resources (AMLR) Program between 1992 and 2011.
View Article and Find Full Text PDFWater Res
December 2024
Centre for Nature Positive Solutions, Biosciences and Food Technology Discipline, School of Science, RMIT University, Melbourne, VIC 3000, Australia.
Nutrient loading is a major driver of seagrass ecosystem decline and also threatens the capacity for seagrass ecosystems to act as 'blue carbon' sinks. Dissolved organic carbon (DOC) represents a crucial component of carbon storage in seagrass ecosystems, with refractory DOC (RDOC) playing a key role in long-term (millennial time scale) carbon stocks. The processes governing RDOC are heavily influenced by microbial activity.
View Article and Find Full Text PDFDeer are the most abundant large herbivores in temperate and boreal forests across the Northern Hemisphere. They are ecosystem engineers known to alter understory vegetation and future tree species composition by selective browsing. Also, deer have strong impacts on faunistic groups, often mediated by vegetation.
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