A bacterial strain, arapr2, was isolated from agricultural soil sampled in Reims, France. Based on its 16S rRNA gene sequence, the strain was affiliated to the family and more specifically to the genus . The strain had 98.31 % 16S rRNA gene sequence similarity to its closest relative CR11 and 98.25 % to NCCP-246. Genome relatedness indexes revealed that the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between arapr2 and its closest relative ( CR11) were 92.97 % and 52.00 %, respectively; for NCCP-246, the ANI and dDDH values were 82.46 and 27.6%, respectively. The genomic DNA of strain arapr2 was 6.02 Mbp long, had a DNA G+C content of 40.4 mol% and had 5504 protein-coding genes. The results obtained in this study suggests that strain arapr2 (CIP 111872=LMG 31848) represents a new species for which the name sp. nov. is proposed. Due to the fact that this strain has been isolated using wheat straw as carbon source, this novel bacterial strain represents a promising biotechnological tool for the fractionation of lignocellulosic biomass in the context of biorefinery development.
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http://dx.doi.org/10.1099/ijsem.0.004963 | DOI Listing |
Curr Res Microb Sci
August 2024
Université de Reims Champagne Ardennes, INRAE, FARE, UMR A 614, Chaire AFERE, 51097 Reims, France.
Long seen as non-valorisable waste, agricultural co-products are increasingly used in biorefinery processes. Co-culture appears as new trend for to improve the degradation of lignocellulose and improve the production of bioproducts. The goal of the study was to setup inter-domain co-cultures with high capabilities of lignocellulose degradation using a pluridisciplinary approach combining bioinformatics, enzymology, transcriptomics.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
August 2021
Université de Reims Champagne Ardenne, INRAE, FARE, UMR A 614, Chaire AFERE, 51097 Reims, France.
A bacterial strain, arapr2, was isolated from agricultural soil sampled in Reims, France. Based on its 16S rRNA gene sequence, the strain was affiliated to the family and more specifically to the genus . The strain had 98.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!