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Qaidamihabitans albus gen. nov., sp. nov., a new member of the family Pseudonocardiaceae, and transfer of Prauserella shujinwangii to Qaidamihabitans gen. nov. as Qaidamihabitans shujinwangii comb. nov. | LitMetric

Qaidamihabitans albus gen. nov., sp. nov., a new member of the family Pseudonocardiaceae, and transfer of Prauserella shujinwangii to Qaidamihabitans gen. nov. as Qaidamihabitans shujinwangii comb. nov.

Arch Microbiol

Yunnan Institute of Microbiology, Key Laboratory for Conservation and Utilization of Bio-Resource, and Key Laboratory for Microbial Resources of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China.

Published: November 2021

AI Article Synopsis

  • A new actinomycete strain, YIM S01255, was isolated from a salt lake, showing optimal growth in certain NaCl concentrations, pH levels, and temperatures.
  • It has unique biochemical signatures, including specific amino acids, sugars, and fatty acids, distinguishing it within the Pseudonocardiaceae family.
  • Due to its distinct genetic features and phylogenetic analysis, YIM S01255 is proposed as a novel species and genus, named Qaidamihabitans albus, with closely related species being reclassified under this new genus.

Article Abstract

A novel mycelium-forming actinomycete strain, designated YIM S01255 were isolated from a salt lake. Optimal growth occurred in the presence of 0-5.0% (w/v) NaCl, at pH 7.0-8.0, and at 37 °C. Strain YIM S01255 contained meso-diaminopimelic acid as the diagnostic diamino acid, and glucose, galactose and arabinose as the whole-cell sugars. The major fatty acid (> 5.0%) were iso-C, iso-CH and iso-C. The major menaquinone were MK-9(H) and MK-8(H). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, phosphatidylinositolmannoside and phosphatidylinositol. The DNA G + C content was 70.7 mol%. The 16S rRNA gene sequence of the strain showed high similarity to members of genera in the family Pseudonocardiaceae with values less than 95.8%, and most closely related to the genus Amycolatopsis. Both of phylogenetic analysis based on 16S rRNA gene sequences and the up-to-date bacterial genome sequences analysis revealed that strains YIM S01255 and Prauserella shujinwangii XJ46 formed a distinct monophyletic clade and was separated from the other members within the family Pseudonocardiaceae. The average nucleotide identity (ANI) values and digital DNA-DNA hybridization (dDDH) between the two strains were 81.0% and 40.6%, respectively. The distinctive polyphasic evidences differentiated YIM S01255 from members of the family Pseudonocardiaceae, so strain YIM S01255 is considered to represent a novel species of a novel genus of the family Pseudonocardiaceae, for which the name Qaidamihabitans albus gen. nov., sp. nov. is proposed. The type strain of genus Qaidamihabitans is YIM S01255 (= KCTC 49476 = CGMCC 4.7684). Moreover, Prauserella shujinwangii is also proposed to being transferred into the genus Qaidamihabitans as Qaidamihabitans shujinwangii comb. nov. (type strain XJ46 = CGMCC 4.7125 = JCM 19736).

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Source
http://dx.doi.org/10.1007/s00203-021-02512-2DOI Listing

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