DFT and MD simulation investigation of favipiravir as an emerging antiviral option against viral protease (3CL) of SARS-CoV-2.

J Mol Struct

Department of Physics and Materials Science and Engineering, Jaypee Institute of Information Technology, Noida, Uttar Pradesh 201309, India.

Published: December 2021

As per date, around 20 million COVID-19 cases reported from across the globe due to a tiny 125 nm sized virus: SARS-CoV-2 which has created a pandemic and left an unforgettable impact on our world. Besides vaccine, medical community is in a race to identify an effective drug, which can fight against this disease effectively. Favipiravir () has recently attracted too much attention as an effective repurposed drug against COVID-19. In the present study, the pertinency of has been tested as an antiviral option against viral protease (3CL) of SARS-CoV-2 with the help of density functional theory (DFT) and MD Simulation. Different electronic properties of F such as atomic charges, molecular electrostatic properties (MEP), chemical reactivity and absorption analysis have been studied by DFT. In order to understand the interaction and stability of inhibitor against viral protease, molecular docking and MD simulation have been performed. Various output like interaction energies, number of intermolecular hydrogen bonding, binding energy etc. have established the elucidate role of for the management of CoV-2 virus for which there is no approved therapies till now. Our findings highlighted the need to further evaluate as a potential antiviral against SARS-CoV-2.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8342190PMC
http://dx.doi.org/10.1016/j.molstruc.2021.131253DOI Listing

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