RNA-Seq data from human semen suggests that the study of the sperm transcriptome requires the previous elimination from the ejaculates of somatic cells carrying a larger load of RNA. Semen purification is also carried to study the sperm transcriptome in other species including swine and it is often done by density gradient centrifugation to obtain viable spermatozoa from fresh ejaculates or artificial insemination doses, thereby limiting the throughput and remoteness of the samples that can be processed in one study. The aim of this work was to evaluate the impact of purification with density gradient centrifugation by BoviPure on porcine sperm. Four boar ejaculates were purified with BoviPure and their transcriptome sequenced by RNA-Seq was compared with the RNA-Seq profiles of their paired non-purified sample. Seven thousand five hundred and nineteen protein coding genes were identified. Correlation, cluster, and principal component analysis indicated high-although not complete-similarity between the purified and the paired non-purified ejaculates. 372 genes displayed differentially abundant RNA levels between treatments. Most of these genes had lower abundances after purification and were mostly related to translation, transcription and metabolic processes. We detected a significant change in the proportion of genes of epididymal origin within the differentially abundant genes (1.3%) when compared with the catalog of unaltered genes (0.2%). In contrast, the proportion of testis-specific genes was higher in the group of unaltered genes (4%) when compared to the list of differentially abundant genes (0%). No proportion differences were identified for prostate, white blood, lymph node, tonsil, duodenum, skeletal muscle, liver, and mammary gland. Altogether, these results suggest that the purification impacts on the RNA levels of a small number of genes which are most likely caused by the removal of epididymal epithelial cells but also premature germinal cells, immature or abnormal spermatozoa or seminal exosomes with a distinct load of RNAs.
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http://dx.doi.org/10.3389/fvets.2021.668158 | DOI Listing |
Int J Biol Macromol
January 2025
Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing 210037, China; International Innovation Center for Forest Chemicals and Materials, Nanjing Forestry University, Nanjing 210037, China. Electronic address:
Harnessing ionic gradients to generate electricity has inspired the development of nanofluidic membranes with charged nanochannels for osmotic energy conversion. However, achieving high-performance osmotic energy output remains elusive due to the trade-off between ion selectivity and nanochannel membrane permeability. In this study, we report a homogeneous nanofluidic membrane, composed of sulfonated nanoporous carbon (SPC) and TEMPO-oxidized cellulose nanofibers (T-CNF), engineered to overcome these limitations.
View Article and Find Full Text PDFWater Res
January 2025
State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China. Electronic address:
The almost hydrophobic PVDF membrane (PVDF matrix) commonly exhibited excellent performance in pollutant rejection but with poor anti-fouling performance. This study intended to develop the rejection performance and enhance anti-fouling of the PVDF membrane in an O/UF/BAC system for high quality water production through leveraging the advantages of in-situ ozonation and the nature of the PVDF membrane. Reduced density gradient (RDG) analysis demonstrated that the PVDF membrane exhibited excellent ozone resistance by reducing hydrogen bonds and electrostatic interactions between the membrane surface and ozone.
View Article and Find Full Text PDFMaterials (Basel)
December 2024
School of Mechanical and Power Engineering, Henan Polytechnic University, Jiaozuo 454003, China.
Nickel (Ni) single-layer coatings were electrodeposited under varying pulse periods (T), duty cycles (θ), and average current densities (i) using four distinct pulse current waveforms: rectangular (Rec), triangular (Tri), ramp-up triangular (Rup), and ramp-down triangular (Rdn). This study demonstrated, through dynamic polarization curves and surface morphology analysis, that single-layer coatings showed relatively good corrosion resistance when deposited at shorter pulse periods, larger duty cycles, and higher average current densities. Moreover, compared with other pulse current waveforms, single-layer coatings electrodeposited at T = 10 ms, θ = 0.
View Article and Find Full Text PDFPolymers (Basel)
January 2025
Research Laboratory of Asymmetric Synthesis and Molecular Engineering of Materials for Organic Electronic (LR18ES19), Department of Physics, Faculty of Sciences of Monastir, University of Monastir, Avenue of Environment, Monastir 5019, Tunisia.
This paper explores a novel group of D-π-A configurations that has been specifically created for organic solar cell applications. In these material compounds, the phenothiazine, the furan, and two derivatives of the thienyl-fused IC group act as the donor, the π-conjugated spacer, and the end-group acceptors, respectively. We assess the impact of substituents by introducing bromine atoms at two potential substitution sites on each end-group acceptor (EG1 and EG2).
View Article and Find Full Text PDFJ Gastrointest Surg
January 2025
Familial and Hereditary Cancers Institute, Tehran, Iran. Electronic address:
Background: Understanding the heterogeneity of a population at risk is an important step in the early detection of gastric cancer. We aimed to cluster demographic, hematological, and biochemical markers of gastric cancer in a heterogeneous sample of patients.
Methods: Data of 695 adult patients (50.
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