The anaerobic hypersaline sediments of an ephemeral pond from the S'Avall solar salterns constituted an excellent study system because of their easy accessibility, as well as the analogy of their microbial assemblages with some known deep-sea hypersaline anaerobic brines. By means of shotgun metagenomics and 16S rRNA gene amplicon sequencing, the microbial composition of the sediment was shown to be stable in time and space. The communities were formed by prokaryote representatives with a clear inferred anaerobic metabolism, mainly related to the methane, sulfur and nitrate cycles. The most conspicuous finding was the inverted nature of the vertical stratification. Contrarily to what could be expected, a methanogenic archaeal metabolism was found to dominate in the upper layers, whereas Bacteria with fermentative and anaerobic respiration metabolisms increased with depth. We could demonstrate the methanogenic nature of the members of candidate lineages DHVE2 and MSBL1, which were present in high abundance in this system, and described, for the first time, viruses infecting these lineages. Members of the putatively active aerobic genera Salinibacter and Halorubrum were detected especially in the deepest layers for which we hypothesize that either oxygen could be sporadically available, or they could perform anaerobic metabolisms. We also report a novel repertoire of virus species thriving in these sediments, which had special relevance because of their lysogenic lifestyles.
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http://dx.doi.org/10.1016/j.syapm.2021.126231 | DOI Listing |
Environ Sci Technol
January 2025
Department of Earth, Planetary, and Space Sciences, University of California, Los Angeles, California 90095, United States.
Wetland methane emissions are the primary natural contributor to the global methane budget, accounting for approximately one-third of total emissions from natural and anthropogenic sources. Anaerobic oxidation of methane (AOM) serves as the major sink of methane in anoxic wetland sediments, where electron acceptors are present, thereby effectively mitigating its emissions. Nevertheless, environmental controls on electron acceptors, in particular, the ubiquitous iron oxides, involved in AOM are poorly understood.
View Article and Find Full Text PDFSci Rep
December 2024
Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, Sevilla, Spain.
The genus Spiribacter encompasses halophilic bacteria widely distributed in hypersaline environments worldwide. Despite their ecological significance, initially isolating Spiribacter species under laboratory settings was challenging due to the lack of knowledge of their growth and cultivation requirements. However, with improved understanding of their ecological niche and metabolic pathways, additional species of Spiribacter have been successfully isolated and identified from diverse locations around the globe.
View Article and Find Full Text PDFJ Environ Manage
December 2024
Key Laboratory of the Three Gorges Reservoir Region's Eco-Environment, Ministry of Education, Chongqing University, Chongqing, 400045, PR China. Electronic address:
J Eukaryot Microbiol
November 2024
Department of Biology, and Institute for Comparative Genomics, Dalhousie University, Halifax, Nova Scotia, Canada.
Metamonads are a large and exclusively anaerobic group of protists. Additionally, they are one of the three clades proposed to ancestrally possess an "excavate" cell morphology, with a conspicuous ventral groove accompanied by a posterior flagellum with a vane. Here, we cultivate and characterize four anaerobic bacterivorous flagellates from hypersaline and alkaline soda lake environments, which represent a novel clade.
View Article and Find Full Text PDFEnviron Sci Ecotechnol
July 2024
School of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
Biosynthesis and biodegradation of microorganisms critically underpin the development of biotechnology, new drugs and therapies, and environmental remediation. However, most uncultured microbial species along with their metabolic capacities in extreme environments, remain obscured. Here we unravel the metabolic potential of microbial dark matters (MDMs) in four deep-inland hypersaline lakes in Xinjiang, China.
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