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Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of replication in circular replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses.
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| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8248882 | PMC |
| http://dx.doi.org/10.1128/MRA.00424-21 | DOI Listing |
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StemLoop-Finder: a Tool for the Detection of DNA Hairpins with Conserved Motifs.
Microbiol Resour Announc
July 2021
Department of Biology, Center for Life in Extreme Environments, Portland State University, Portland, Oregon, USA.
Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of replication in circular replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses.
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