Relieving efforts in palm-tree tissue sampling for population genetics analyses.

Ecol Evol

Facultad de Medicina Pontificia Universidad Católica del Ecuador Quito Pichincha Ecuador.

Published: June 2021

AI Article Synopsis

  • - The study investigates the use of root tissues as an alternative source of nucleic acids for genetic studies in palm trees, especially when access to young leaves is limited due to species-specific challenges.
  • - It compares DNA quality and concentration between root and leaf tissues, as well as different storage and extraction methods, finding no significant differences between the two tissue sources or extraction techniques.
  • - Results indicate that root tissues, particularly when stored in 70% and 90% alcohol, can yield higher concentrations of DNA compared to leaf tissues, suggesting root tissue could enhance sampling in population studies and potentially be applied to other plants facing similar issues.

Article Abstract

The young leaves are the main source of nucleic acids for population genetic studies in palm-trees; however, the access to this tissue may be limited by specific features of each species. Using root tissues as an alternative source of nucleic acids could facilitate the sampling in large populations.This study tests root tissue viability as an alternative nucleic acid source (root versus. leaf) and explores different protocols (tissue storage and DNA extraction methods) to obtain high-quality DNA samples.The results showed no significant differences in DNA concentration (603.7 vs. 599.1 ng/μl) and quality ratios (A260/280:2.1 vs. 1.9, and A260/230:2.1 vs. 2.0) for the comparisons of tissue source (leaf vs. root) and DNA extraction method (manual vs. kit). For tissue storage method, DNA concentration was significantly higher for root tissues stored in 70% and 90% alcohol solutions (692.8 and 822.6 ng/μl, respectively) versus those obtained from leaf tissue (603.7 ng/μl); however, for the quality parameters, no differences were found.Results showed the effective potential of using root tissue as an alternative source for nucleic acids, which could facilitate population sampling of palm-tree species for future studies, and this methodological alternative could be applied to other plant systems with similar sampling challenges. ​.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8216967PMC
http://dx.doi.org/10.1002/ece3.7624DOI Listing

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