We introduce a Reed-Frost epidemic model with recursive contact tracing and asymptomatic transmission. This generalizes the branching-process model introduced by the authors in a previous work (Bulchandani et al 2021045004) to finite populations and general contact networks. We simulate the model numerically for two representative examples, the complete graph and the square lattice. On both networks, we observe clear signatures of a contact-tracing phase transition from an 'epidemic phase' to an 'immune phase' as contact-network coverage is increased. We verify that away from the singular line of perfect tracing, the finite-size scaling of the contact-tracing phase transition on each network lies in the corresponding percolation universality class. Finally, we use the model to quantify the efficacy of recursive contact-tracing in regimes where epidemic spread is not contained.
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http://dx.doi.org/10.1088/1478-3975/ac0fd1 | DOI Listing |
Sci Rep
November 2024
Cardiff School of technologies, Cardiff Metropolitan University, Cardiff, UK.
The research on aerial manipulation systems has been increased rapidly in recent years. These systems are very attractive for a wide range of applications due to their unique features. However, dynamics, control and manipulation tasks of such systems are quite challenging because they are naturally unstable, have very fast dynamics, have strong nonlinearities, are very susceptible to parameters variations due to carrying a payload besides the external disturbances, and have complex inverse kinematics.
View Article and Find Full Text PDFComput Biol Chem
December 2024
Computational Biology Lab, National Center for Bioinformatics (NCB), Quaid-i-Azam University, Islamabad 45320, Pakistan. Electronic address:
Genome Res
October 2024
Luddy School of Informatics, Computing and Engineering, Indiana University, Bloomington, Indiana 47408, USA
Recently developed protein language models have enabled a variety of applications with the protein contextual embeddings they produce. Per-protein representations (each protein is represented as a vector of fixed dimension) can be derived via averaging the embeddings of individual residues, or applying matrix transformation techniques such as the discrete cosine transformation (DCT) to matrices of residue embeddings. Such protein-level embeddings have been applied to enable fast searches of similar proteins; however, limitations have been found; for example, PROST is good at detecting global homologs but not local homologs, and knnProtT5 excels for proteins with single domains but not multidomain proteins.
View Article and Find Full Text PDFJ Colloid Interface Sci
December 2024
Univ Lyon, Ecole Centrale de Lyon, CNRS, ENTPE, Laboratoire de Tribologie et Dynamique des Systèmes, UMR 5513, 69130 Ecully, France. Electronic address:
In nature, superhydrophobicity is almost systematically associated with a multiscale topography. Nevertheless, multiscale-textured natural surfaces can either produce water-repellent properties such as on the sacred lotus leaf or high liquid-to-solid adhesion such as on the rose petal. To conceive bio-inspired surfaces with self-cleaning properties, the proper contributions of each topographical scale to the wetting behavior need to be investigated.
View Article and Find Full Text PDFJ Anim Sci
January 2024
Ecole Nationale Vétérinaire, Maisons-Alfort 94704, France.
Breeding for phenotype in herding dogs (HDs) mainly relies on their performance in national field trial competitions, which has been shown to be inadequate for identifying HDs suited for real livestock farming conditions. In this study, a different field trial with a new scoring system consisting of 28 items to consider was designed to assess young HDs, the results of which culminated in a statement of adequate phenotype (AP) or non-adequate phenotype (NAP). An AP HD was defined as being able: to control the direction of a flock, to keep it grouped close to a handler when needed, to confront animals it is dealing with in a respectful manner, and able to create movement of the flock without excessive disturbance, threatening or attacking it through chasing, or uncontrolled biting.
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