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| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8178685 | PMC |
| http://dx.doi.org/10.1016/j.ymgmr.2021.100736 | DOI Listing |
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Background: Treatment of atrial fibrillation (AF) with catheter ablation (CA) has evolved significantly. However, real-world data on long-term outcomes are limited, particularly in low- and middle-income countries.
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SAMURAI: shallow analysis of copy number alterations using a reproducible and integrated bioinformatics pipeline.
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Department of Biology, University of Padova, Via U.Bassi 58/ B, 35131, Italy.
Shallow whole-genome sequencing (sWGS) offers a cost-effective approach to detect copy number alterations (CNAs). However, there remains a gap for a standardized workflow specifically designed for sWGS analysis. To address this need, in this work we present SAMURAI, a bioinformatics pipeline specifically designed for analyzing CNAs from sWGS data in a standardized and reproducible manner.
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