High quality genome sequence of KS1 isolated from bovine digital dermatitis.

J Anim Sci Technol

Department of Animal Science and Technology, Sunchon National University, Suncheon 57922, Korea.

Published: November 2020

KS1, a fastidious anaerobe, was isolated from a bovine digital dermatitis (BDD)-infected dairy cattle in Chungnam, Korea. Initial data indicated that KS1 exhibited putative virulent phenotypic characteristics. This study reports the whole genome assembly and annotation of KS1 (KCTC14157BP) to assist in the identification of putative pathogenicity related factors. The whole genome of KS1 was sequenced using PacBio RSII and Illumina HiSeqXTen platforms. The assembled KS1 genome comprises 16 contigs with a total size of 3,769,422 bp and an overall guanine-cytosine (GC) content of 40.03%. Annotation revealed 3,460 protein-coding genes, as well as 49 transfer RNA- and 6 ribosomal RNA-coding genes. The results of this study provide insight into the pathogenicity of KS1.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721586PMC
http://dx.doi.org/10.5187/jast.2020.62.6.948DOI Listing

Publication Analysis

Top Keywords

isolated bovine
8
bovine digital
8
digital dermatitis
8
ks1
7
high quality
4
genome
4
quality genome
4
genome sequence
4
sequence ks1
4
ks1 isolated
4

Similar Publications

Bovine coronavirus (BCoV), a significant cattle pathogen causing enteric and respiratory diseases, is primarily detected using reverse transcription-polymerase chain reaction. Our objective was to develop a novel detection method for BCoV by matrix-assisted laser desorption/ionization‒time-of-flight mass spectrometry (MALDI-TOF MS). Peptide mass fingerprint analysis revealed that nucleocapsid (N), membrane (M), and hemagglutinin-esterase (HE) were three main BCoV proteins.

View Article and Find Full Text PDF

Lumpy skin disease (LSD) is an emerging, highly contagious transboundary disease of bovines caused by the Lumpy skin disease virus (LSDV), responsible for substantial economic losses to the dairy, meat, and leather industries in Pakistan as well as various countries around the world. Epidemiological information on LSD is scarce in Punjab, Pakistan. Therefore, a molecular epidemiological study was conducted in two agro-ecologically diverse districts (Bhakkar and Jhang) of Punjab, Pakistan.

View Article and Find Full Text PDF

4-O-Methylglucuronoxylan from Hygrophila Ringens var. Ringens Seeds: Chemical Composition and Anti-Inflammatory Activity.

Macromol Biosci

January 2025

Friedrich Schiller University Jena, Institute for Organic Chemistry and Macromolecular Chemistry, Center of Excellence for Polysaccharide Research, Humboldtstraße 10, D-07743, Jena, Germany.

Hygrophila ringens var. ringens is a medicinal plant of the Acanthaceae family. A soluble polysaccharide is extracted from H.

View Article and Find Full Text PDF

Antibiotic use (ABU) in animals is postulated to be a major contributor to selection of antibiotic resistance (ABR) which subsequently causes infections in human populations. However, there are few quantifications of the size of this association. Denmark, as a country with high levels of pig production and strong ABR surveillance data, is an ideal case study for exploring this association.

View Article and Find Full Text PDF

The entomopathogenic fungus isolate ICIPE 7 is being developed as an eco-friendly alternative to chemical acaricides in managing natural tick infestation on livestock. Its impact on tick infestation and tick-borne infections in cattle under natural conditions are yet unclear. We conducted a randomized controlled field trial to assess the safety and effects of Tickoff® (a formulation of isolate ICIPE 7) and the chemical acaricide Triatix® on tick infestation and incidence of and in extensively grazed zebu cattle in coastal Kenya.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!