eDNA metabarcoding is an effective molecular-based identification method for the biosurveillance of flighted insects. An eDNA surveillance approach maintains specimens for secondary morphological identification useful for regulatory applications. This study identified species using eDNA metabarcoding and compared these results to morphological identifications of trapped specimens. Insects were collected using ultraviolet (UV) lighted fan traps containing a saturated salt (NaCl) solution from two locations in Guelph, Ontario, Canada. There were forty-two specimens collected in total. Molecular identification detected four species, , , and Using morphological identification, two out of these four taxonomic ranks were confirmed at the species level ( and ) and one was confirmed at the subgenus level ( []). No molecular detection of species occurred in traps with an abundance of less than three individuals per taxon. The inconsistency in identifying specimens to the species level punctuates the need for curated DNA reference libraries for . In conclusion, the saturated salt (NaCl) solution preserved the morphological characteristics and the eDNA.
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http://dx.doi.org/10.3390/insects12050401 | DOI Listing |
Many sharks, rays and skates are highly threatened and vulnerable to overexploitation, as such reliable monitoring of elasmobranchs is key to effective management and conservation. The mobile and elusive nature of these species makes monitoring challenging, particularly in temperate waters with low visibility. Environmental DNA (eDNA) methods present an opportunity to study these species in the absence of visual identification or invasive techniques.
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February 2025
Marine Research Institute, Klaipėda University, H. Manto 84, 92294 Klaipėda, Lithuania.
Over the last few decades, climate change in Svalbard (European Arctic) has led to the emergence and growth of periglacial coastal lagoons in the place of retreating glaciers. In these emerging water bodies, new ecosystems are formed, consisting of elements presumably entering the lagoon from the melting glacier, the surrounding tundra water bodies and the coastal ocean. The data presented here were collected from an emerging lagoon in the western region of Spitsbergen, Svalbard, situated between the retreating Eidembreen Glacier and Eidembukta Bay in 2022-2023.
View Article and Find Full Text PDFMicroorganisms
December 2024
Key Laboratory of Aquatic Animal Nutrition and Health, Freshwater Fisheries Research Center, Chinese Academy of Fishery Science, Wuxi 214081, China.
, a parasitic ciliate, causes "white spot disease" in freshwater fish and poses a significant threat to global freshwater aquaculture. Eliminating the free-swimming theront stage from the aquaculture environment is a critical measure for controlling infections. The natural predator of theronts in fish-farming ponds were identified using fluorescent dye-labelled live theronts and quantitative PCR; meanwhile, the zooplankton community composition in the positive ponds of detected by quantitative PCR were analyzed by eDNA metabarcoding assay.
View Article and Find Full Text PDFPLoS One
January 2025
Bio Bureau Biotechnology, Rio de Janeiro, Rio de Janeiro, Brazil.
Monitoring biodiversity on a large scale, such as in hydropower reservoirs, poses scientific challenges. Conventional methods such as passive fishing gear are prone to various biases, while the utilization of environmental DNA (eDNA) metabarcoding has been restricted. Most eDNA studies have primarily focused on replicating results from traditional methods, which themselves have limitations regarding representativeness and bias.
View Article and Find Full Text PDFEcol Evol
January 2025
Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Polar Terrestrial Environmental Systems Potsdam Germany.
Mountains with complex terrain and steep environmental gradients are biodiversity hotspots such as the eastern Tibetan Plateau (TP). However, it is generally assumed that mountain terrain plays a secondary role in plant species assembly on a millennial time-scale compared to climate change. Here, we investigate plant richness and community changes during the last 18,000 years at two sites: Lake Naleng and Lake Ximen on the eastern TP with similar elevation and climatic conditions but contrasting terrain.
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