Dissecting druggability of ABC transporter proteins in species through network modeling.

J Biomol Struct Dyn

Department of Pathogenesis and Cellular Response, National Centre for Cell Science, NCCS Complex, Pune, India.

Published: November 2022

(Mtb) is an infectious disease that affects nearly 9.6 million people every year. Metals are important determinants of growth and pathogenicity of mycobacterium. In the present study, we have analyzed protein-protein interaction networks belonging to the iron, sulfur and molybdenum metabolism of Mycobacterium. Our analysis has identified some of the important target proteins one among them being irtA. Iron taken up by siderophores from the host is transported to irtA through which iron enters Mycobacterium. Thus, irtA plays a major role as an iron transporter in Mycobacterium. As irtA protein structure was not solved experimentally, we have predicted 3D structure of irtA. After successful model evaluation, we have identified thiosemicarbazones as possible drug candidates for irtA. Henceforth, we have designed five analogues of thiosemicarbazones and tested for their efficacy against irtA using molecular docking, among them analogue 1 showed a very good efficacy.Communicated by Ramaswamy H. Sarma.

Download full-text PDF

Source
http://dx.doi.org/10.1080/07391102.2021.1911856DOI Listing

Publication Analysis

Top Keywords

irta iron
8
mycobacterium irta
8
irta
7
dissecting druggability
4
druggability abc
4
abc transporter
4
transporter proteins
4
proteins species
4
species network
4
network modeling
4

Similar Publications

: ATP-binding cassette (ABC) transporters are prominent drug targets due to their highly efficient trafficking capabilities and their significant physiological and clinical roles. Gaining insight into their biophysical and biomechanistic properties is crucial to maximize their pharmacological potential. : In this study, we present the biochemical and biophysical characterization, and phylogenetic analysis of the domains of () ABC transporters: the exporter Rv1348 (IrtA) and the importer system Rv1349-Rv2895c (IrtB-Rv2895c), both involved in siderophore-mediated iron uptake.

View Article and Find Full Text PDF
Article Synopsis
  • - Iron hexacyanoferrate (FeHCF), also known as Prussian blue, was successfully grown on a reduced graphene oxide substrate using a pulsed electrodeposition method, enhancing its performance in energy storage applications.
  • - The FeHCF electrode achieved a specific volumetric capacitance of 88 F/cm³ and a remarkable cycling stability, maintaining 93.7% capacitance retention after 10,000 charge-discharge cycles in 1 M KCl electrolyte.
  • - When two FeHCF electrodes were combined to create a symmetrical supercapacitor, it displayed a voltage range of 2 V and provided an energy density of 27.5 mWh/cm³, along with a high power density of 330
View Article and Find Full Text PDF

Nitrosyl-heme and Heme Iron Intake from Processed Meats and Risk of Colorectal Cancer in the EPIC-Spain Cohort.

Cancer Epidemiol Biomarkers Prev

June 2024

Unit of Nutrition and Cancer, Epidemiology Research Programme, Catalan Institute of Oncology (ICO), Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.

Background: The International Agency for Research on Cancer classified processed meats (PM) as "carcinogenic" and red meat as "probably carcinogenic" for humans. The possible relationship between colorectal cancer risk and the mechanisms involved in the carcinogenesis of PMs have not been established yet. Nitrosyl-heme and heme iron have been proposed as potential-related compounds.

View Article and Find Full Text PDF

Background: The consumption of processed meats (PMs) and red meats are linked to the likelihood of developing colorectal cancer. Various theories have been proposed to explain this connection, focusing on nitrosyl-heme and heme iron intake. We hypothesized that differences in nitrosyl-heme and heme iron intakes will be associated with various sociodemographic and lifestyle factors.

View Article and Find Full Text PDF
Article Synopsis
  • Iron is crucial for interactions between hosts and microorganisms, and hosts use nutritional immunity to restrict iron availability during infections.
  • Plant roots, like those in Arabidopsis thaliana, typically increase iron accessibility in response to deficiency, but this can also promote harmful bacteria growth.
  • The study found that bacterium-associated molecules can suppress root iron acquisition by degrading a signaling peptide (IMA1), impacting both iron uptake and plant immunity against bacterial threats.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!