The complete chloroplast genome sequence of (Solanaceae).

Mitochondrial DNA B Resour

Yuxi Zhongyan Tobacco Seed Co., Ltd, Yuxi, P.R. China.

Published: March 2021

In present study, we report the complete chloroplast genome of , a species endemic to eastern coast of Australia. The total genome size of is 156,073 bp in length, containing a large single-copy region of 86,672 bp, a small single-copy region of 18,581 bp, and two inverted repeat regions of 25,410 bp. The all GC content of chloroplast genome is 38.4%. It encodes a total of 129 unique genes, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes, of which seven tRNA, four rRNA and seven protein-coding genes are duplicated in the IR. Sixteen genes contain a single intron, and only two genes have two introns. Phylogenetic analysis results strongly supported that was closely related to and .

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995905PMC
http://dx.doi.org/10.1080/23802359.2021.1899074DOI Listing

Publication Analysis

Top Keywords

chloroplast genome
12
complete chloroplast
8
single-copy region
8
protein-coding genes
8
genes trna
8
genes
7
genome
4
genome sequence
4
sequence solanaceae
4
solanaceae study
4

Similar Publications

Protocol for the purification of the plastid-encoded RNA polymerase from transplastomic tobacco plants.

STAR Protoc

January 2025

National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University, Wuhan 430070, China. Electronic address:

The plastid-encoded RNA polymerase (PEP) plays an essential role in the transcription of the chloroplast genome. Here, we present a strategy to purify the transcriptionally active protein complex from transplastomic tobacco (Nicotiana tabacum) lines in which one of the PEP core subunits is fused to an epitope tag. We describe experimental procedures for designing transformation constructs for PEP purification, selection, and analysis of transplastomic tobacco plants.

View Article and Find Full Text PDF

The Hypericaceae family, comprising nine genera and over seven hundred species, includes plants traditionally used for medicinal purposes. In this study, we performed high-throughput sequencing on three species: , , and , and conducted comparative genomic analyses with related species. The chloroplast genome sizes were 152,654 bp, 122,570 bp, and 137,652 bp, respectively, with an average GC content of 37.

View Article and Find Full Text PDF

is a member of the Styracaceae family, which is well-known for its remarkable ornamental and medicinal properties. In this research, we conducted comparative analysis of the chloroplast genomes from four samples of representing . The results demonstrated that the chloroplast genome of four samples ranging from 157,103 bp to 158,357 bp exhibited a typical quadripartite structure, including one large single-copy (LSC) region (90,131 bp to 90,342 bp), one small single-copy (SSC) region (18,467 bp to 18,785 bp), and two inverted repeat regions (IRs) (24,115 bp to 24,261 bp).

View Article and Find Full Text PDF

Background: Phaius Lour. (Collabieae, Orchidaceae) is a small genus consisting of about 45 species, with highly ornamental and medicinal values. However, the phylogenetic relationship of Phaius among Calanthe s.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!