Structured illumination microscopy (SIM) has become a widely used tool for insight into biomedical challenges due to its rapid, long-term, and super-resolution (SR) imaging. However, artifacts that often appear in SIM images have long brought into question its fidelity, and might cause misinterpretation of biological structures. We present HiFi-SIM, a high-fidelity SIM reconstruction algorithm, by engineering the effective point spread function (PSF) into an ideal form. HiFi-SIM can effectively reduce commonly seen artifacts without loss of fine structures and improve the axial sectioning for samples with strong background. In particular, HiFi-SIM is not sensitive to the commonly used PSF and reconstruction parameters; hence, it lowers the requirements for dedicated PSF calibration and complicated parameter adjustment, thus promoting SIM as a daily imaging tool.
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http://dx.doi.org/10.1038/s41377-021-00513-w | DOI Listing |
Methods Enzymol
January 2025
Life Science, Bar Ilan University, Ramat Gan, Israel. Electronic address:
Saccharomyces cerevisiae, a model eukaryotic organism with a rich history in research and industry, has become a pivotal tool for studying Adenosine Deaminase Acting on RNA (ADAR) enzymes despite lacking these enzymes endogenously. This chapter reviews the diverse methodologies harnessed using yeast to elucidate ADAR structure and function, emphasizing its role in advancing our understanding of RNA editing. Initially, Saccharomyces cerevisiae was instrumental in the high-yield purification of ADARs, addressing challenges associated with enzyme stability and activity in other systems.
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January 2025
Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States; Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States. Electronic address:
The mitochondrial flavoenzymes proline dehydrogenase (PRODH) and hydroxyproline dehydrogenase (PRODH2) catalyze the first steps of proline and hydroxyproline catabolism, respectively. The enzymes are targets for chemical probe development because of their roles in cancer cell metabolism (PRODH) and primary hyperoxaluria (PRODH2). Mechanism-based inactivators of PRODH target the FAD by covalently modifying the N5 atom, with N-propargylglycine (NPPG) being the current best-in-class of this type of probe.
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January 2025
Business School, Hebei University of Economics and Business, Shijiazhuang, 050062, China.
The development and implementation of county carbon control action plans in the Yellow River Basin (YRB) are crucial for realizing the "dual carbon" goals and modernizing national governance. Utilizing remote sensing data from 2001 to 2020, this study constructs a light-carbon conversion model and a carbon footprint model to simulate the carbon footprint of county energy consumption in the YRB. Employing spatial autocorrelation and spatial Durbin models, the study examines the temporal-spatial evolution characteristics and spatial effect mechanism.
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January 2025
Department of Physics, College of Science, University of Thi-Qar, Nasiriya, Iraq.
This work studies the generation of the orbital angular momentum (OAM) beam in the double quantum dot-metal nanoparticle (DQD-MNP) system under the application of the OAM beam. First, an analytical model is derived to attain the relations of probe and generated fields as a distance function in the DQD-MNP system under OAM applied field and spontaneously generated coherence (SGC) components. The calculation here is of material property; it differs from others by calculating energy states of the DQDs and the computation of the transition momenta between quantum dot (QD)-QD and QD-wetting layer (WL) transitions.
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January 2025
College of Rare Earth, Jiangxi University of Science and Technology, Ganzhou, 341000, China.
Utilizing aerosol jet printing (AJP), this study achieves a breakthrough in fabricating luminescent fibers with superior optical performance and flexibility. The YO:Eu coated high silica glass fibers demonstrate luminous efficiency twice that of traditional methods, retaining 80% after 250 bending cycles and 90% after sweat immersion. This AJP technique not only elevates the potential of smart fabrics but also represents a significant innovation in lighting technology, providing new ideas for advanced functional fiber fabrication.
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