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gen. nov., sp. nov. a novel alkaliphilic bacterium of the family . | LitMetric

gen. nov., sp. nov. a novel alkaliphilic bacterium of the family .

Int J Syst Evol Microbiol

Department of Microbiology, Faculty of Science, Eötvös Loránd University, Pázmány Péter stny. 1/C, H-1117 Budapest, Hungary.

Published: June 2019

Three Gram-stain-negative, non-motile, oxidase- and catalase-positive, rod-shaped, black, facultative phototrophic bacterial strains, RG-N-1a, DMA-N-7a and RA-N-9 were isolated from the water sample from Lake Fertő/Neusiedler See (Hungary). Phylogenetic analysis based on the 16S rRNA gene sequences revealed that the strains form a distinct linage within the family and their closest relatives are K13M18 (96.32%) followed by PAMC 27389 (96.25%). The novel bacterial strains prefer alkaline environments and grow optimally at 23-33 °C in the presence of NaCl (1-2 w/v%). Bacteriochlorophyll a was detected. Cells contained exclusively ubiquinone Q-10. The major cellular fatty acids were Cω7, Ciso ω5 C 3-OH and Cωc 11-methyl. The polar lipid profile contains diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified phospholipid and four unidentified lipids. The assembled draft genome of RG-N-1a had 33 contigs with N50 values 315 027 nt, 96× genome coverage, total length of 4 326 551 bp and a DNA G+C content of 64.9%. Genome-based calculations (genome-to-genome distance and DNA G+C percentage) and pairwise amino acid identity (AAI <73.5%) indicate that RG-N-1a represents a novel genus. RG-N-1a (=DSM 108317=NCAIM B.02647) is suggested as the type strain of a novel genus and species in the family , for which the name gen. nov., sp. nov. is proposed.

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http://dx.doi.org/10.1099/ijsem.0.004762DOI Listing

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